Update to v0.3.9

hackingmaterials · Jul 31, 2018 · f8a75e8 · f8a75e8
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diff --git a/docs/_sources/changelog.rst.txt b/docs/_sources/changelog.rst.txt
@@ -5,6 +5,16 @@
 matminer Changelog
 ==================
 
+**v0.3.9**
+
+* BandEdge renamed to Hybridization, gives smoother featurizations (M. Dylla, A. Faghaninia)
+* Add hoverinfo option for many plots (A. Dunn)
+* minor fixes (A. Faghaninia)
+
+**v0.3.8**
+
+.. warning:: This is an unsupported / aborted release
+
 
 **v0.3.7**
 

diff --git a/docs/_sources/featurizer_summary.rst.txt b/docs/_sources/featurizer_summary.rst.txt
@@ -86,7 +86,7 @@ Name Description
 ===================== ================================================================================================================================================================================================================================================================================================================================================================================================================
 :code:`DOSFeaturizer` Significant character and contribution of the density of state from a `[more] <https://hackingmaterials.github.io/matminer/matminer.featurizers.html#matminer.featurizers.dos.DOSFeaturizer>`_
 :code:`DopingFermi` The fermi level (w.r.t. selected reference energy) associated with a `[more] <https://hackingmaterials.github.io/matminer/matminer.featurizers.html#matminer.featurizers.dos.DopingFermi>`_
-:code:`BandEdge`  Orbital character of the band edges (CBM/VBM) based on a density of `[more] <https://hackingmaterials.github.io/matminer/matminer.featurizers.html#matminer.featurizers.dos.BandEdge>`_
+:code:`Hybridization` quantify s/p/d/f orbital character and their hybridizations at band edges `[more] <https://hackingmaterials.github.io/matminer/matminer.featurizers.html#matminer.featurizers.dos.Hybridization>`_
 ===================== ================================================================================================================================================================================================================================================================================================================================================================================================================
 
 

diff --git a/docs/_static/documentation_options.js b/docs/_static/documentation_options.js
@@ -1,6 +1,6 @@
 var DOCUMENTATION_OPTIONS = {
  URL_ROOT: '',
- VERSION: '0.3.7',
+ VERSION: '0.3.9',
  LANGUAGE: 'None',
  COLLAPSE_INDEX: false,
  FILE_SUFFIX: '.html',

diff --git a/docs/changelog.html b/docs/changelog.html
@@ -6,7 +6,7 @@
  <head>
  <meta http-equiv="X-UA-Compatible" content="IE=Edge" />
  <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
- <title>MatMiner Changlog &#8212; matminer 0.3.7 documentation</title>
+ <title>MatMiner Changlog &#8212; matminer 0.3.9 documentation</title>
  <link rel="stylesheet" href="_static/nature.css" type="text/css" />
  <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
  <script type="text/javascript" src="_static/documentation_options.js"></script>
@@ -28,7 +28,7 @@ <h3>Navigation</h3>
  <li class="right" >
  <a href="py-modindex.html" title="Python Module Index"
  >modules</a> |</li>
- <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.7 documentation</a> &#187;</li> 
+ <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.9 documentation</a> &#187;</li> 
  </ul>
  </div> 
 
@@ -39,6 +39,17 @@ <h3>Navigation</h3>
 
  <div class="section" id="matminer-changelog">
 <h1>matminer Changelog<a class="headerlink" href="#matminer-changelog" title="Permalink to this headline">¶</a></h1>
+<p><strong>v0.3.9</strong></p>
+<ul class="simple">
+<li>BandEdge renamed to Hybridization, gives smoother featurizations (M. Dylla, A. Faghaninia)</li>
+<li>Add hoverinfo option for many plots (A. Dunn)</li>
+<li>minor fixes (A. Faghaninia)</li>
+</ul>
+<p><strong>v0.3.8</strong></p>
+<div class="admonition warning">
+<p class="first admonition-title">Warning</p>
+<p class="last">This is an unsupported / aborted release</p>
+</div>
 <p><strong>v0.3.7</strong></p>
 <ul class="simple">
 <li>faster implementation of GaussianSymmFunc (L. Ward)</li>
@@ -319,7 +330,7 @@ <h3>Navigation</h3>
  <li class="right" >
  <a href="py-modindex.html" title="Python Module Index"
  >modules</a> |</li>
- <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.7 documentation</a> &#187;</li> 
+ <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.9 documentation</a> &#187;</li> 
  </ul>
  </div>
 

diff --git a/docs/contributors.html b/docs/contributors.html
@@ -6,7 +6,7 @@
  <head>
  <meta http-equiv="X-UA-Compatible" content="IE=Edge" />
  <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
- <title>MatMiner Contributors &#8212; matminer 0.3.7 documentation</title>
+ <title>MatMiner Contributors &#8212; matminer 0.3.9 documentation</title>
  <link rel="stylesheet" href="_static/nature.css" type="text/css" />
  <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
  <script type="text/javascript" src="_static/documentation_options.js"></script>
@@ -28,7 +28,7 @@ <h3>Navigation</h3>
  <li class="right" >
  <a href="py-modindex.html" title="Python Module Index"
  >modules</a> |</li>
- <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.7 documentation</a> &#187;</li> 
+ <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.9 documentation</a> &#187;</li> 
  </ul>
  </div> 
 
@@ -133,7 +133,7 @@ <h3>Navigation</h3>
  <li class="right" >
  <a href="py-modindex.html" title="Python Module Index"
  >modules</a> |</li>
- <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.7 documentation</a> &#187;</li> 
+ <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.9 documentation</a> &#187;</li> 
  </ul>
  </div>
 

diff --git a/docs/example_bulkmod.html b/docs/example_bulkmod.html
@@ -6,7 +6,7 @@
  <head>
  <meta http-equiv="X-UA-Compatible" content="IE=Edge" />
  <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
- <title>Predicting bulk moduli with matminer &#8212; matminer 0.3.7 documentation</title>
+ <title>Predicting bulk moduli with matminer &#8212; matminer 0.3.9 documentation</title>
  <link rel="stylesheet" href="_static/nature.css" type="text/css" />
  <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
  <script type="text/javascript" src="_static/documentation_options.js"></script>
@@ -28,7 +28,7 @@ <h3>Navigation</h3>
  <li class="right" >
  <a href="py-modindex.html" title="Python Module Index"
  >modules</a> |</li>
- <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.7 documentation</a> &#187;</li> 
+ <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.9 documentation</a> &#187;</li> 
  </ul>
  </div> 
 
@@ -361,7 +361,7 @@ <h3>Navigation</h3>
  <li class="right" >
  <a href="py-modindex.html" title="Python Module Index"
  >modules</a> |</li>
- <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.7 documentation</a> &#187;</li> 
+ <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.9 documentation</a> &#187;</li> 
  </ul>
  </div>
 

diff --git a/docs/featurizer_summary.html b/docs/featurizer_summary.html
@@ -6,7 +6,7 @@
  <head>
  <meta http-equiv="X-UA-Compatible" content="IE=Edge" />
  <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
- <title>Table of Featurizers &#8212; matminer 0.3.7 documentation</title>
+ <title>Table of Featurizers &#8212; matminer 0.3.9 documentation</title>
  <link rel="stylesheet" href="_static/nature.css" type="text/css" />
  <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
  <script type="text/javascript" src="_static/documentation_options.js"></script>
@@ -28,7 +28,7 @@ <h3>Navigation</h3>
  <li class="right" >
  <a href="py-modindex.html" title="Python Module Index"
  >modules</a> |</li>
- <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.7 documentation</a> &#187;</li> 
+ <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.9 documentation</a> &#187;</li> 
  </ul>
  </div> 
 
@@ -182,8 +182,8 @@ <h3>Features based on a material’s electronic density of states.<a class="head
 <tr class="row-odd"><td><code class="code docutils literal notranslate"><span class="pre">DopingFermi</span></code></td>
 <td>The fermi level (w.r.t. selected reference energy) associated with a <a class="reference external" href="https://hackingmaterials.github.io/matminer/matminer.featurizers.html#matminer.featurizers.dos.DopingFermi">[more]</a></td>
 </tr>
-<tr class="row-even"><td><code class="code docutils literal notranslate"><span class="pre">BandEdge</span></code></td>
-<td>Orbital character of the band edges (CBM/VBM) based on a density of <a class="reference external" href="https://hackingmaterials.github.io/matminer/matminer.featurizers.html#matminer.featurizers.dos.BandEdge">[more]</a></td>
+<tr class="row-even"><td><code class="code docutils literal notranslate"><span class="pre">Hybridization</span></code></td>
+<td>quantify s/p/d/f orbital character and their hybridizations at band edges <a class="reference external" href="https://hackingmaterials.github.io/matminer/matminer.featurizers.html#matminer.featurizers.dos.Hybridization">[more]</a></td>
 </tr>
 </tbody>
 </table>
@@ -420,7 +420,7 @@ <h3>Navigation</h3>
  <li class="right" >
  <a href="py-modindex.html" title="Python Module Index"
  >modules</a> |</li>
- <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.7 documentation</a> &#187;</li> 
+ <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.9 documentation</a> &#187;</li> 
  </ul>
  </div>
 

diff --git a/docs/genindex.html b/docs/genindex.html
@@ -7,7 +7,7 @@
  <head>
  <meta http-equiv="X-UA-Compatible" content="IE=Edge" />
  <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
- <title>Index &#8212; matminer 0.3.7 documentation</title>
+ <title>Index &#8212; matminer 0.3.9 documentation</title>
  <link rel="stylesheet" href="_static/nature.css" type="text/css" />
  <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
  <script type="text/javascript" src="_static/documentation_options.js"></script>
@@ -29,7 +29,7 @@ <h3>Navigation</h3>
  <li class="right" >
  <a href="py-modindex.html" title="Python Module Index"
  >modules</a> |</li>
- <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.7 documentation</a> &#187;</li> 
+ <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.9 documentation</a> &#187;</li> 
  </ul>
  </div> 
 
@@ -113,12 +113,12 @@ <h2 id="_">_</h2>
  <li><a href="matminer.featurizers.html#matminer.featurizers.composition.YangSolidSolution.__init__">(matminer.featurizers.composition.YangSolidSolution method)</a>
 </li>
  <li><a href="matminer.featurizers.html#matminer.featurizers.deprecated.CrystalSiteFingerprint.__init__">(matminer.featurizers.deprecated.CrystalSiteFingerprint method)</a>
-</li>
- <li><a href="matminer.featurizers.html#matminer.featurizers.dos.BandEdge.__init__">(matminer.featurizers.dos.BandEdge method)</a>
 </li>
  <li><a href="matminer.featurizers.html#matminer.featurizers.dos.DOSFeaturizer.__init__">(matminer.featurizers.dos.DOSFeaturizer method)</a>
 </li>
  <li><a href="matminer.featurizers.html#matminer.featurizers.dos.DopingFermi.__init__">(matminer.featurizers.dos.DopingFermi method)</a>
+</li>
+ <li><a href="matminer.featurizers.html#matminer.featurizers.dos.Hybridization.__init__">(matminer.featurizers.dos.Hybridization method)</a>
 </li>
  <li><a href="matminer.featurizers.html#matminer.featurizers.function.FunctionFeaturizer.__init__">(matminer.featurizers.function.FunctionFeaturizer method)</a>
 </li>
@@ -242,8 +242,6 @@ <h2 id="B">B</h2>
  <li><a href="matminer.featurizers.html#matminer.featurizers.structure.BagofBonds">BagofBonds (class in matminer.featurizers.structure)</a>
 </li>
  <li><a href="matminer.featurizers.html#matminer.featurizers.composition.BandCenter">BandCenter (class in matminer.featurizers.composition)</a>
-</li>
- <li><a href="matminer.featurizers.html#matminer.featurizers.dos.BandEdge">BandEdge (class in matminer.featurizers.dos)</a>
 </li>
  <li><a href="matminer.featurizers.html#matminer.featurizers.bandstructure.BandFeaturizer">BandFeaturizer (class in matminer.featurizers.bandstructure)</a>
 </li>
@@ -537,12 +535,12 @@ <h2 id="F">F</h2>
  <li><a href="matminer.featurizers.html#matminer.featurizers.composition.YangSolidSolution.feature_labels">(matminer.featurizers.composition.YangSolidSolution method)</a>
 </li>
  <li><a href="matminer.featurizers.html#matminer.featurizers.deprecated.CrystalSiteFingerprint.feature_labels">(matminer.featurizers.deprecated.CrystalSiteFingerprint method)</a>
-</li>
- <li><a href="matminer.featurizers.html#matminer.featurizers.dos.BandEdge.feature_labels">(matminer.featurizers.dos.BandEdge method)</a>
 </li>
  <li><a href="matminer.featurizers.html#matminer.featurizers.dos.DOSFeaturizer.feature_labels">(matminer.featurizers.dos.DOSFeaturizer method)</a>
 </li>
  <li><a href="matminer.featurizers.html#matminer.featurizers.dos.DopingFermi.feature_labels">(matminer.featurizers.dos.DopingFermi method)</a>
+</li>
+ <li><a href="matminer.featurizers.html#matminer.featurizers.dos.Hybridization.feature_labels">(matminer.featurizers.dos.Hybridization method)</a>
 </li>
  <li><a href="matminer.featurizers.html#matminer.featurizers.function.FunctionFeaturizer.feature_labels">(matminer.featurizers.function.FunctionFeaturizer method)</a>
 </li>
@@ -653,12 +651,12 @@ <h2 id="F">F</h2>
  <li><a href="matminer.featurizers.html#matminer.featurizers.composition.YangSolidSolution.featurize">(matminer.featurizers.composition.YangSolidSolution method)</a>
 </li>
  <li><a href="matminer.featurizers.html#matminer.featurizers.deprecated.CrystalSiteFingerprint.featurize">(matminer.featurizers.deprecated.CrystalSiteFingerprint method)</a>
-</li>
- <li><a href="matminer.featurizers.html#matminer.featurizers.dos.BandEdge.featurize">(matminer.featurizers.dos.BandEdge method)</a>
 </li>
  <li><a href="matminer.featurizers.html#matminer.featurizers.dos.DOSFeaturizer.featurize">(matminer.featurizers.dos.DOSFeaturizer method)</a>
 </li>
  <li><a href="matminer.featurizers.html#matminer.featurizers.dos.DopingFermi.featurize">(matminer.featurizers.dos.DopingFermi method)</a>
+</li>
+ <li><a href="matminer.featurizers.html#matminer.featurizers.dos.Hybridization.featurize">(matminer.featurizers.dos.Hybridization method)</a>
 </li>
  <li><a href="matminer.featurizers.html#matminer.featurizers.function.FunctionFeaturizer.featurize">(matminer.featurizers.function.FunctionFeaturizer method)</a>
 </li>
@@ -928,6 +926,8 @@ <h2 id="H">H</h2>
  <li><a href="matminer.featurizers.html#matminer.featurizers.stats.PropertyStats.holder_mean">holder_mean() (matminer.featurizers.stats.PropertyStats static method)</a>
 </li>
  <li><a href="matminer.utils.html#matminer.utils.utils.homogenize_multiindex">homogenize_multiindex() (in module matminer.utils.utils)</a>
+</li>
+ <li><a href="matminer.featurizers.html#matminer.featurizers.dos.Hybridization">Hybridization (class in matminer.featurizers.dos)</a>
 </li>
  </ul></td>
 </tr></table>
@@ -977,12 +977,12 @@ <h2 id="I">I</h2>
  <li><a href="matminer.featurizers.html#matminer.featurizers.composition.YangSolidSolution.implementors">(matminer.featurizers.composition.YangSolidSolution method)</a>
 </li>
  <li><a href="matminer.featurizers.html#matminer.featurizers.deprecated.CrystalSiteFingerprint.implementors">(matminer.featurizers.deprecated.CrystalSiteFingerprint method)</a>
-</li>
- <li><a href="matminer.featurizers.html#matminer.featurizers.dos.BandEdge.implementors">(matminer.featurizers.dos.BandEdge method)</a>
 </li>
  <li><a href="matminer.featurizers.html#matminer.featurizers.dos.DOSFeaturizer.implementors">(matminer.featurizers.dos.DOSFeaturizer method)</a>
 </li>
  <li><a href="matminer.featurizers.html#matminer.featurizers.dos.DopingFermi.implementors">(matminer.featurizers.dos.DopingFermi method)</a>
+</li>
+ <li><a href="matminer.featurizers.html#matminer.featurizers.dos.Hybridization.implementors">(matminer.featurizers.dos.Hybridization method)</a>
 </li>
  <li><a href="matminer.featurizers.html#matminer.featurizers.function.FunctionFeaturizer.implementors">(matminer.featurizers.function.FunctionFeaturizer method)</a>
 </li>
@@ -1460,7 +1460,7 @@ <h3>Navigation</h3>
  <li class="right" >
  <a href="py-modindex.html" title="Python Module Index"
  >modules</a> |</li>
- <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.7 documentation</a> &#187;</li> 
+ <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.9 documentation</a> &#187;</li> 
  </ul>
  </div>
 

diff --git a/docs/index.html b/docs/index.html
@@ -6,7 +6,7 @@
  <head>
  <meta http-equiv="X-UA-Compatible" content="IE=Edge" />
  <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
- <title>matminer (Materials Data Mining) &#8212; matminer 0.3.7 documentation</title>
+ <title>matminer (Materials Data Mining) &#8212; matminer 0.3.9 documentation</title>
  <link rel="stylesheet" href="_static/nature.css" type="text/css" />
  <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
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@@ -28,7 +28,7 @@ <h3>Navigation</h3>
  <li class="right" >
  <a href="py-modindex.html" title="Python Module Index"
  >modules</a> |</li>
- <li class="nav-item nav-item-0"><a href="#">matminer 0.3.7 documentation</a> &#187;</li> 
+ <li class="nav-item nav-item-0"><a href="#">matminer 0.3.9 documentation</a> &#187;</li> 
  </ul>
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@@ -229,7 +229,7 @@ <h3>Navigation</h3>
  <li class="right" >
  <a href="py-modindex.html" title="Python Module Index"
  >modules</a> |</li>
- <li class="nav-item nav-item-0"><a href="#">matminer 0.3.7 documentation</a> &#187;</li> 
+ <li class="nav-item nav-item-0"><a href="#">matminer 0.3.9 documentation</a> &#187;</li> 
  </ul>
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diff --git a/docs/installation.html b/docs/installation.html
@@ -6,7 +6,7 @@
  <head>
  <meta http-equiv="X-UA-Compatible" content="IE=Edge" />
  <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
- <title>Installing matminer &#8212; matminer 0.3.7 documentation</title>
+ <title>Installing matminer &#8212; matminer 0.3.9 documentation</title>
  <link rel="stylesheet" href="_static/nature.css" type="text/css" />
  <link rel="stylesheet" href="_static/pygments.css" type="text/css" />
  <script type="text/javascript" src="_static/documentation_options.js"></script>
@@ -28,7 +28,7 @@ <h3>Navigation</h3>
  <li class="right" >
  <a href="py-modindex.html" title="Python Module Index"
  >modules</a> |</li>
- <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.7 documentation</a> &#187;</li> 
+ <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.9 documentation</a> &#187;</li> 
  </ul>
  </div> 
 
@@ -120,7 +120,7 @@ <h3>Navigation</h3>
  <li class="right" >
  <a href="py-modindex.html" title="Python Module Index"
  >modules</a> |</li>
- <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.7 documentation</a> &#187;</li> 
+ <li class="nav-item nav-item-0"><a href="index.html">matminer 0.3.9 documentation</a> &#187;</li> 
  </ul>
  </div>