Skip to content

Releases: haesleinhuepf/napari-skimage-regionprops

0.10.1

19 May 16:50
Compare
Choose a tag to compare
0.10.1 Pre-release
Pre-release

Bug fixes

  • When double-clicking a column header that was generated from an opencl-backed labels layer, the parametric image could not be created (error in scikit-image maparray)

0.10.0

14 Mar 12:16
Compare
Choose a tag to compare
0.10.0 Pre-release
Pre-release

Backwards compatiblity breaking changes

  • regionprops_measure_things_inside_things was renamed to regionprops_measure_relationship_to_other_channels.

Bug fixes

  • add Deprecated package as a dependency by @lazigu in #71

Other changes

New Contributors

Full Changelog: 0.9.0...0.10.0

0.9.0

11 Mar 08:16
Compare
Choose a tag to compare
0.9.0 Pre-release
Pre-release

New features

  • map_measurements_on_labels() function for generating parametric map images from unsorted tables and non-sequential label images. (thanks to @romainGuiet and @lazigu for raising the issue and @zoccoler for fixing it)
  • The load_csv function/menu now has a parameter/checkbox show_table for optionally not showing the table in the user interface. This solves issues with processing large tables (thanks to @thorstenwagner for proposing this)

Potentially backwards compatibility breaking changes

  • Support for unsorted, non-sequential measurement tables was added. Thus, when double-clicking a table column header, the results may be different compared to older versions. This is technically a bugfix.

Deprecated functions

  • visualize_measurement_on_labels() is deprecated. Use map_measurements_on_labels() instead.
  • relabel() is deprecated. Use skimage.util.map_array() instead.

Full Changelog: 0.8.2...0.9.0

0.8.2

07 Mar 10:30
Compare
Choose a tag to compare
0.8.2 Pre-release
Pre-release

New features

New Contributors

Full Changelog: 0.8.1...0.8.2

0.8.1

02 Feb 19:29
Compare
Choose a tag to compare
0.8.1 Pre-release
Pre-release

What's Changed

  • Catch arbitrary import exceptions by @tcompa in #51

Full Changelog: 0.8.0...0.8.1

0.8.0

29 Jan 11:04
Compare
Choose a tag to compare
0.8.0 Pre-release
Pre-release

What's Changed

Potentially backwards compatibility breaking changes

We changed import statements internally so that we can execute functions in environments where napari and qt don't work. If you experience any issues with that, please open an issue and so that we can fix it.

New Contributors

Full Changelog: 0.7.0...0.8.0

0.7.0

16 Jan 20:09
25a0789
Compare
Choose a tag to compare
0.7.0 Pre-release
Pre-release

Potentially backwards compatibility breaking bugfix:

  • Measuring convex-hull based measurements in 3D has been disabled due to a bug in scikit-image (thanks to @zoccoler for fixing and @GenevieveBuckley and @marabuuu for reporting)

See also:

0.6.2

15 Jan 16:57
Compare
Choose a tag to compare
0.6.2 Pre-release
Pre-release

Changed menu locations

  • Some menus have been moved from Measurement to Measurement tables and Measurement maps

0.6.0

20 Dec 23:08
05d7901
Compare
Choose a tag to compare
0.6.0 Pre-release
Pre-release

Bug fixes

  • frame not defined error when clicking on labels (thanks to @constantinpape for reporting)

Backwards compatibility breaking changes

  • Double-clicking on a table column and / or calling visualize_measurement_on_labels() on timelapse data now generates a dask-backed 4D layer. In version < 0.6.0 it created a 3D layer of the current timepoint. If you want to have the former functionality, duplicate the current timepoint using the Tools > Utilities > Duplicate timepoint (nsr) menu.

Full Changelog: 0.5.7...0.6.0

0.5.7

17 Dec 17:48
Compare
Choose a tag to compare
0.5.7 Pre-release
Pre-release

Bugfix: