Fixing error in generating SKL_3D output images

hansenjn · Jul 20, 2020 · b4cbc77 · b4cbc77
1 parent b01b632
commit b4cbc77
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Showing 3 changed files with 8 additions and 7 deletions.
diff --git a/pom.xml b/pom.xml
@@ -11,7 +11,7 @@
 
  	<artifactId>CiliaQ_</artifactId>
  	<groupId>JNH</groupId>
-    <version>0.1.2-SNAPSHOT</version>
+    <version>0.1.3-SNAPSHOT</version>
     <name>CiliaQ</name>
     <description>A plugin to analyze cilia in 3D and 4D images.</description>
 

diff --git a/src/main/java/ciliaQ_jnh/CiliaQMain.java b/src/main/java/ciliaQ_jnh/CiliaQMain.java
@@ -1,10 +1,10 @@
 package ciliaQ_jnh;
 /** ===============================================================================
- * CiliaQ, a plugin for imagej - Version 0.1.2
+ * CiliaQ, a plugin for imagej - Version 0.1.3
  * 
  * Copyright (C) 2017-2020 Jan Niklas Hansen
  * First version: June 30, 2017  
- * This Version: July 13, 2020
+ * This Version: July 20, 2020
  * 
  * Parts of the code were inherited from MotiQ
  * (https://github.com/hansenjn/MotiQ).
@@ -43,7 +43,7 @@
 public class CiliaQMain implements PlugIn, Measurements {
 	//Name variables
 	static final String PLUGINNAME = "CiliaQ";
-	static final String PLUGINVERSION = "0.1.2";
+	static final String PLUGINVERSION = "0.1.3";
 
 	//Fix fonts
 	static final Font SuperHeadingFont = new Font("Sansserif", Font.BOLD, 16);
@@ -3326,7 +3326,8 @@ private void saveSkeletonOverviewImageNonTimeLapse(String savePath, ImagePlus im
 		try {
 			ImagePlus imp3D;	
 			progress.updateBarText("Producing 3D NTL skeleton overview image...launch 3Dvis");
-			v3D = new Visualizer3D(imp, 3.0f);
+			v3D = new Visualizer3D(impOut, 3.0f);
+			v3D.setImage(impOut);
 			v3D.setAngle(10.0f, -10.0f, 0.0f);
 			v3D.setObjectLightValue(1.2f);
 			v3D.setLightPosX(-0.25f);

diff --git a/src/main/resources/plugins.config b/src/main/resources/plugins.config
@@ -24,8 +24,8 @@
 # A plugin to analyze cilia in confocal 3D and 4D images
 
 # Author: Jan Niklas Hansen <Jan.Hansen@uni-bonn.de>
-# Version: 0.1.2
+# Version: 0.1.3
 # Date: 2017/06/30
 # Requires: ImageJ
 
-Plugins>CiliaQ, "CiliaQ v0.1.2", ciliaQ_jnh.CiliaQMain
+Plugins>CiliaQ, "CiliaQ v0.1.3", ciliaQ_jnh.CiliaQMain