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minor fix
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hasindu2008 committed Feb 17, 2024
1 parent 73df18a commit 84b86f9
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion test/test_eventalign_pafsam.sh
Original file line number Diff line number Diff line change
Expand Up @@ -74,7 +74,7 @@ execute_test ${testdir}/result.txt ${testdir}/eventalign.paf 50
execute_test ${testdir}/result.txt ${testdir}/eventalign.sam 5

testdir=test/uhr_rna004_1k
download_test_set "https://f5c.bioinf.science/uhr_rna004_reads_1k"
download_test_set "https://f5c.bioinf.science/uhr_rna004_1k"

./f5c eventalign -b ${testdir}/PNXRXX240011_reads_1k.bam -g ${testdir}/gencode.v40.transcripts.fa -r ${testdir}/PNXRXX240011_reads_1k.fastq \
--slow5 ${testdir}/PNXRXX240011_reads_1k.blow5 --rna -c > ${testdir}/result.txt || die "eventalign failed"
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