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Health Data Science Sandbox

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  1. proteomics-sandbox proteomics-sandbox Public

    A resource for biomedical students and researchers. Includes proteomics software tools like FragPipe, MaxQuant, PDV, SearchGUI, ThermoRawFileParser, and PeptideShaker. Offers a user-friendly interf…

    HTML 9 2

  2. bulk_RNAseq_course bulk_RNAseq_course Public

    Repository for bulk RNAseq course of the Danish Health Data Science Sandbox project.

    Shell 6 4

  3. NGS_summer_course_Aarhus NGS_summer_course_Aarhus Public

    Repository for the NGS summer course at Aarhus university

    Jupyter Notebook 6 3

  4. scRNASeq_course scRNASeq_course Public

    Repository for single cell RNAseq course of the Danish Health Data Science Sandbox project.

    Jupyter Notebook 3 2

  5. hds-sandbox.github.io hds-sandbox.github.io Public

    Website for the Health Data Science Sandbox

    HTML 2 2

  6. AdvancedSingleCell AdvancedSingleCell Public

    Advanced tutorials for single cell data analysis

    Jupyter Notebook 2

Repositories

Showing 10 of 27 repositories
  • proteomics-sandbox Public

    A resource for biomedical students and researchers. Includes proteomics software tools like FragPipe, MaxQuant, PDV, SearchGUI, ThermoRawFileParser, and PeptideShaker. Offers a user-friendly interface, automated identification and quantification, comprehensive data analysis, and lightweight clone feature for optimized storage.

    hds-sandbox/proteomics-sandbox’s past year of commit activity
    HTML 9 2 0 1 Updated Nov 8, 2024
  • hds-sandbox.github.io Public

    Website for the Health Data Science Sandbox

    hds-sandbox/hds-sandbox.github.io’s past year of commit activity
    HTML 2 2 0 0 Updated Nov 6, 2024
  • RDM_biodata_course Public

    Short course on Research Data Management for NGS data

    hds-sandbox/RDM_biodata_course’s past year of commit activity
    HTML 0 CC-BY-SA-4.0 2 0 0 Updated Nov 6, 2024
  • HPC-lab Public
    hds-sandbox/HPC-lab’s past year of commit activity
    HTML 0 1 0 0 Updated Nov 5, 2024
  • GDKworkshops Public

    Workshops on GenomeDK cluster at Aarhus University: Introduction, pipeline creation with gwf, and more

    hds-sandbox/GDKworkshops’s past year of commit activity
    Shell 0 CC-BY-SA-4.0 0 0 0 Updated Oct 11, 2024
  • scverse-2024-workshop Public template

    Dimensionality reduction and interactive web visualization for the scverse 2024 conference

    hds-sandbox/scverse-2024-workshop’s past year of commit activity
    Jupyter Notebook 1 CC-BY-SA-4.0 0 0 0 Updated Sep 16, 2024
  • NGS_summer_course_Aarhus Public

    Repository for the NGS summer course at Aarhus university

    hds-sandbox/NGS_summer_course_Aarhus’s past year of commit activity
    Jupyter Notebook 6 3 0 0 Updated Aug 20, 2024
  • GWAS_course Public

    GWAS course material

    hds-sandbox/GWAS_course’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Aug 8, 2024
  • jupyterlab-quarto Public Forked from quarto-dev/jupyterlab-quarto

    Quarto JupyterLab Extension which includes personalized callouts

    hds-sandbox/jupyterlab-quarto’s past year of commit activity
    TypeScript 0 BSD-3-Clause 3 0 0 Updated Aug 7, 2024
  • course-template Public template

    A course template for Sandbox courses

    hds-sandbox/course-template’s past year of commit activity
    1 CC-BY-SA-4.0 2 0 0 Updated Jun 21, 2024
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