Skip to content
/ pysb Public
forked from pysb/pysb

Python framework for Systems Biology modeling

License

Notifications You must be signed in to change notification settings

himoto/pysb

 
 

Repository files navigation

PySB

Join the chat at https://gitter.im/pysb/pysb Continuous Integration

Python Systems Biology modeling framework

http://pysb.org/

PySB (pronounced "Pie Ess Bee") is a framework for building rule-based mathematical models of biochemical systems. It works nicely with scientific Python libraries such as NumPy, SciPy and SymPy for model simulation and analysis.

Installation

PySB depends on the following:

For full instructions, see the Installation chapter of the manual at http://docs.pysb.org/en/latest/installation.html

Documentation

The manual is available online at http://docs.pysb.org/. You can also generate the documentation locally by installing Sphinx and running the following commands:

$ cd doc
$ make html

Then open _build/html/index.html in your web browser.

About

Python framework for Systems Biology modeling

Resources

License

Stars

Watchers

Forks

Packages

No packages published

Languages

  • Python 98.4%
  • Other 1.6%