Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

input_master.py refactor proposal using GMTK interface #144

Closed
Closed
Show file tree
Hide file tree
Changes from 70 commits
Commits
Show all changes
72 commits
Select commit Hold shift + click to select a range
c7c4ef2
added gmtk.py
aparnagopalakrishnan7 Jul 30, 2020
ccbe39e
Update input_master.py
aparnagopalakrishnan7 Jul 30, 2020
44420ab
added InlineMX/MCSection, changes to GMTK types
aparnagopalakrishnan7 Aug 4, 2020
f95cb44
array error fixed
aparnagopalakrishnan7 Aug 4, 2020
fcd8a32
updated DetCPT and MX param names
aparnagopalakrishnan7 Aug 4, 2020
11a1c18
updated dense_cpt cardinalities
aparnagopalakrishnan7 Aug 4, 2020
279c14b
fixed typos and added Object
aparnagopalakrishnan7 Aug 4, 2020
3c01e2c
added InputMaster.save
aparnagopalakrishnan7 Aug 6, 2020
103de8e
InputMaster save
aparnagopalakrishnan7 Aug 6, 2020
3c43953
input_master using new gmtk interface
aparnagopalakrishnan7 Aug 6, 2020
0c31df4
Update gmtk.py
aparnagopalakrishnan7 Aug 6, 2020
97417b6
added save
aparnagopalakrishnan7 Aug 6, 2020
a829328
Update gmtk.py
aparnagopalakrishnan7 Aug 6, 2020
42e109c
Update gmtk.py
aparnagopalakrishnan7 Aug 6, 2020
a73b692
Update gmtk.py
aparnagopalakrishnan7 Aug 6, 2020
93165de
Update gmtk.py
aparnagopalakrishnan7 Aug 6, 2020
2569be6
Update gmtk.py
aparnagopalakrishnan7 Aug 7, 2020
67da040
added uniform_from_shape
aparnagopalakrishnan7 Aug 10, 2020
1f9496f
InlineMCSection.__init__
aparnagopalakrishnan7 Aug 12, 2020
506bb5c
get and set attr in Section
aparnagopalakrishnan7 Aug 17, 2020
e92420d
Section.getattr and setattr
aparnagopalakrishnan7 Aug 17, 2020
0de65cf
DiagGaussianMC subclass of object
aparnagopalakrishnan7 Aug 17, 2020
8ee8a97
Section.setattr
aparnagopalakrishnan7 Aug 17, 2020
a8c3386
generate_mean_obj
aparnagopalakrishnan7 Aug 17, 2020
acd2fbe
generate_mean_obj debug
aparnagopalakrishnan7 Aug 17, 2020
2b8cf94
Update input_master.py
aparnagopalakrishnan7 Aug 17, 2020
6fc3e25
added head_track_names
aparnagopalakrishnan7 Aug 18, 2020
4bb6a36
Update input_master.py
aparnagopalakrishnan7 Aug 18, 2020
928960d
removed print statements
aparnagopalakrishnan7 Aug 18, 2020
107b47f
Array.uniform_from_shape dim, InputMaster.save
aparnagopalakrishnan7 Aug 19, 2020
176bc22
added uniform_from_shape() with value
aparnagopalakrishnan7 Aug 19, 2020
72efcc8
DenseCPT dim
aparnagopalakrishnan7 Aug 20, 2020
f72b6f9
denseCPT shape
aparnagopalakrishnan7 Aug 20, 2020
046973a
minor formatting
aparnagopalakrishnan7 Aug 20, 2020
686ceb6
import division
aparnagopalakrishnan7 Aug 20, 2020
8003cc9
Array.diag_value
aparnagopalakrishnan7 Aug 20, 2020
45c9039
encoding
aparnagopalakrishnan7 Aug 20, 2020
4097b11
python version for InputMaster.save()
aparnagopalakrishnan7 Aug 20, 2020
ed28762
Update gmtk.py
aparnagopalakrishnan7 Aug 20, 2020
9021f03
Update gmtk.py
aparnagopalakrishnan7 Aug 20, 2020
31c03f9
uniform_from_shape(kwargs) - default value
aparnagopalakrishnan7 Aug 20, 2020
507645d
Update gmtk.py
aparnagopalakrishnan7 Aug 20, 2020
6447823
Rename segway/gmtk.py to segway/gmtk/input_master.py
aparnagopalakrishnan7 Aug 21, 2020
399b859
Create __init__.py
aparnagopalakrishnan7 Aug 21, 2020
d06510f
added DirichletTab, RealMatParamSpec
aparnagopalakrishnan7 Aug 21, 2020
d143768
import gmtk.input_master
aparnagopalakrishnan7 Aug 21, 2020
bd31503
Update input_master.py
aparnagopalakrishnan7 Aug 21, 2020
86729d2
ParamSpec.generate_dense to DenseCPTParamSpec
aparnagopalakrishnan7 Aug 21, 2020
00fb818
Update input_master.py
aparnagopalakrishnan7 Aug 21, 2020
5ac9c01
test make_dense_cpt_dinucleotide
aparnagopalakrishnan7 Aug 21, 2020
0df949e
changed uniform_from_shape in Array subclasses
aparnagopalakrishnan7 Aug 25, 2020
c083444
added ParamSpec.generate_dirichlet_obj
aparnagopalakrishnan7 Aug 27, 2020
ba95187
added DenseCPT attr extra_row
aparnagopalakrishnan7 Aug 27, 2020
80cdf5a
typo
aparnagopalakrishnan7 Aug 27, 2020
6b22aae
removed unused imports, USE_MFSDG options
aparnagopalakrishnan7 Sep 1, 2020
f1eca06
removed unused import
aparnagopalakrishnan7 Sep 1, 2020
4af4d4a
Update input_master.py
aparnagopalakrishnan7 Sep 1, 2020
5a04402
removed DIST_GAMMA import
aparnagopalakrishnan7 Sep 1, 2020
1a60a19
updated print format
aparnagopalakrishnan7 Sep 1, 2020
6ce5c94
Update input_master.py
aparnagopalakrishnan7 Sep 1, 2020
aeab9f4
Update input_master.py
aparnagopalakrishnan7 Sep 1, 2020
c3c8291
updated format of DirichletTab
aparnagopalakrishnan7 Sep 1, 2020
2e44fe1
added name generators for each gmtk type
aparnagopalakrishnan7 Sep 6, 2020
88e5b60
Update input_master.py
aparnagopalakrishnan7 Sep 6, 2020
0e475f9
fixed typos
aparnagopalakrishnan7 Sep 6, 2020
dd1b4f8
tracks attr in InputMasterSaver
aparnagopalakrishnan7 Sep 6, 2020
5f8f0f1
Update input_master.py
aparnagopalakrishnan7 Sep 6, 2020
f06c9b9
Update input_master.py
aparnagopalakrishnan7 Sep 7, 2020
254bc54
Update input_master.py
aparnagopalakrishnan7 Sep 7, 2020
bd50200
Update input_master.py
aparnagopalakrishnan7 Sep 7, 2020
1e969b7
added gmtk format strings
aparnagopalakrishnan7 Sep 18, 2020
0a041f5
Update input_master.py
aparnagopalakrishnan7 Sep 18, 2020
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
1 change: 1 addition & 0 deletions segway/gmtk/__init__.py
Original file line number Diff line number Diff line change
@@ -0,0 +1 @@

Loading