hoffmangroup · isaiahah · Jul 25, 2023 · Jul 25, 2023 · Jul 25, 2023 · Jul 25, 2023
diff --git a/segway/_util.py b/segway/_util.py
@@ -119,6 +119,8 @@ def data_string(resource):
 POSTERIOR_PROG = OptionBuilder_GMTK("gmtkJT")
 VALIDATE_PROG = OptionBuilder_GMTK("gmtkJT")
 
+LABEL_INDEX = 3
+
 BED_SCORE = "1000"
 BED_STRAND = "."
 INDEX_BED_CHROMSTART = 1

diff --git a/segway/data/input.master.tmpl b/segway/data/input.master.tmpl
diff --git a/segway/data/map_frameIndex_ruler.dt.txt b/segway/data/map_frameIndex_ruler.dt.txt
@@ -1,4 +1,3 @@
-map_frameIndex_ruler
 1
 % is the frameIndex divisible by RULER_SCALE
     -1 { mod(p0, RULER_SCALE) == 0 }
diff --git a/segway/data/map_segTransition_ruler_seg_segCountDown_segCountDown.dt.tmpl b/segway/data/map_segTransition_ruler_seg_segCountDown_segCountDown.dt.tmpl
@@ -1,4 +1,3 @@
-map_segTransition_ruler_seg_segCountDown_segCountDown
 4
     0 2 2 default
       % segTransition(0) == 2 (seg transition):

diff --git a/segway/data/map_seg_segCountDown.dt.tmpl b/segway/data/map_seg_segCountDown.dt.tmpl
@@ -1,4 +1,3 @@
-map_seg_segCountDown
 1
 % this is only used at the beginning of an observation track
 0 $tree
diff --git a/segway/data/map_seg_subseg_obs.dt.txt b/segway/data/map_seg_subseg_obs.dt.txt
@@ -1,5 +1,2 @@
-% XXXopt: good candidate for a linear combination C deterministic mapper
-
-map_seg_subseg_obs
 2       % num parents
         -1 { p0*CARD_SUBSEG + p1 } 
diff --git a/segway/data/map_supervisionLabel_seg_alwaysTrue_semisupervised.dt.txt b/segway/data/map_supervisionLabel_seg_alwaysTrue_semisupervised.dt.txt
@@ -1,4 +1,3 @@
-map_supervisionLabel_seg_alwaysTrue
 2              % num parents
 % first parent is the label: 0 = no label; 1+ = (desired-1)
 % second parent is target