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feat(#638): adapt Anni to load additional drugs without guidelines #111

feat(#638): adapt Anni to load additional drugs without guidelines

feat(#638): adapt Anni to load additional drugs without guidelines #111

Workflow file for this run

name: Annotation Interface
on:
push:
paths:
- '.github/workflows/anni.yml'
- 'yarn.lock'
- 'anni/**'
defaults:
run:
working-directory: ./anni
jobs:
lint:
name: Lint
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- run: yarn
- run: yarn lint
test:
name: Test
runs-on: ubuntu-latest
env:
DB_HOST: localhost
DB_PORT: 27017
DB_USER: mongo
DB_PASSWORD: mongo
services:
mongodb:
image: mongo:5.0
env:
MONGO_INITDB_ROOT_USERNAME: ${{ env.DB_USER }}
MONGO_INITDB_ROOT_PASSWORD: ${{ env.DB_PASSWORD }}
options: >-
--health-cmd mongosh
--health-interval 10s
--health-timeout 5s
--health-retries 5
ports:
- 27017:27017
steps:
- uses: actions/checkout@v2
- run: yarn
- run: yarn test
- uses: actions/upload-artifact@v3
with:
name: coverage-report
path: anni/coverage
codecov:
name: Generate Code Coverage Report
needs: [test]
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- uses: actions/download-artifact@v3
with:
name: coverage-report
path: anni/coverage
- uses: codecov/codecov-action@v2
with:
flags: anni
directory: anni/coverage
build:
name: Build
needs: [lint, test]
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- run: yarn
- run: yarn build