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Fixing typos in documentation #183

Merged
merged 28 commits into from
May 29, 2024
Merged

Fixing typos in documentation #183

merged 28 commits into from
May 29, 2024

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chStaiger
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chStaiger and others added 28 commits April 25, 2024 13:46
* Adding button to upload folder

* Fixes #154

* Summarise upload info for the user.

* Add more info to download; cosmetics

* Fix bug: get mime type if path does not contain an explicit suffix
* Initial logging for session.

* Introduce section for new start of app

* Preset dropdown for ienv

* Logging for up and downloads

* Pylint and some small changes.

* Pylint

* Add tooltips to buttons

* Change order of logging

* Small bugfix in fieexists check

* Logging for metadata

* Logging for ACLs

* Add all logging

* Enable sorting of tables, add configuration buttons in mainmenu

* Shorten tooltips

* Summarize exceptions

* Remove unneccessary commented code
Bumps [pylint](https://github.com/pylint-dev/pylint) from 2.16.2 to 3.1.1.
- [Release notes](https://github.com/pylint-dev/pylint/releases)
- [Commits](pylint-dev/pylint@v2.16.2...v3.1.1)

---
updated-dependencies:
- dependency-name: pylint
  dependency-type: direct:development
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Bumps [pytest-cov](https://github.com/pytest-dev/pytest-cov) from 4.0.0 to 5.0.0.
- [Changelog](https://github.com/pytest-dev/pytest-cov/blob/master/CHANGELOG.rst)
- [Commits](pytest-dev/pytest-cov@v4.0.0...v5.0.0)

---
updated-dependencies:
- dependency-name: pytest-cov
  dependency-type: direct:development
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Bumps [setproctitle](https://github.com/dvarrazzo/py-setproctitle) from 1.3.2 to 1.3.3.
- [Changelog](https://github.com/dvarrazzo/py-setproctitle/blob/master/HISTORY.rst)
- [Commits](dvarrazzo/py-setproctitle@version-1.3.2...version-1.3.3)

---
updated-dependencies:
- dependency-name: setproctitle
  dependency-type: direct:production
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Bumps [flake8](https://github.com/pycqa/flake8) from 6.0.0 to 7.0.0.
- [Commits](PyCQA/flake8@6.0.0...7.0.0)

---
updated-dependencies:
- dependency-name: flake8
  dependency-type: direct:development
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Bumps [pytest](https://github.com/pytest-dev/pytest) from 7.2.1 to 8.2.0.
- [Release notes](https://github.com/pytest-dev/pytest/releases)
- [Changelog](https://github.com/pytest-dev/pytest/blob/main/CHANGELOG.rst)
- [Commits](pytest-dev/pytest@7.2.1...8.2.0)

---
updated-dependencies:
- dependency-name: pytest
  dependency-type: direct:development
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Bumps [pyinstaller](https://github.com/pyinstaller/pyinstaller) from 5.8.0 to 6.6.0.
- [Release notes](https://github.com/pyinstaller/pyinstaller/releases)
- [Changelog](https://github.com/pyinstaller/pyinstaller/blob/develop/doc/CHANGES.rst)
- [Commits](pyinstaller/pyinstaller@v5.8.0...v6.6.0)

---
updated-dependencies:
- dependency-name: pyinstaller
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
* Checking function

* Add config write function

* pylint

* Separate json functions

* Layout for chekc widget

* Adding new widget without functionality

* Config editor and config creator. #158

* Button wording

* Remove unneccessary globals

* Quotes

* Pylint

* Pylint

* update info tab

* pylint

* pylint

* Remove comments. Windows tested!!

* Extra exception for PRC < 2.0.0

* Update ibridgesgui/config.py

Co-authored-by: qubixes <44498096+qubixes@users.noreply.github.com>

* TypeError -> ValueError

* GENERIC irods_env preset

* No WindowStaysOnTopHint

* Remove incomplete import

* Use network check from ibridges 0.1.6

* Ruff

* Add dependency ibridges 0.1.6

* Ruff

* Some cosmetic in output

---------

Co-authored-by: Staiger, Christine <christine.staiger@wur.nl>
Co-authored-by: qubixes <44498096+qubixes@users.noreply.github.com>
updated-dependencies:
- dependency-name: pylint
  dependency-type: direct:development
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
updated-dependencies:
- dependency-name: pytest
  dependency-type: direct:development
  update-type: version-update:semver-patch
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
* Create new tab for search

* Look and feel.

* Search functionlity implemented, still todo extras

* BIgfix and starting implementation of  download

* Functionality of search tab

* Design and ruff

* Cleanup old code

* Update ibridgesgui/search.py

Co-authored-by: qubixes <44498096+qubixes@users.noreply.github.com>

* Update ibridgesgui/search.py

Co-authored-by: qubixes <44498096+qubixes@users.noreply.github.com>

* Update ibridgesgui/search.py

Co-authored-by: qubixes <44498096+qubixes@users.noreply.github.com>

* Update ibridgesgui/search.py

Co-authored-by: qubixes <44498096+qubixes@users.noreply.github.com>

* Update ibridgesgui/search.py

Co-authored-by: qubixes <44498096+qubixes@users.noreply.github.com>

* Update ibridgesgui/search.py

Co-authored-by: qubixes <44498096+qubixes@users.noreply.github.com>

* Simplify list comprehension

* Hint when search takes too long.

* Remove init of info as empty string

---------

Co-authored-by: Staiger, Christine <christine.staiger@wur.nl>
Co-authored-by: qubixes <44498096+qubixes@users.noreply.github.com>
* Place search into an own QT thread.

* Move lengthy search and dowload to threads.

* Small bg fix.

* Log errors

---------

Co-authored-by: Staiger, Christine <christine.staiger@wur.nl>
* Renaming vars  in Main

* Rename vars in search

* Rename vars in info and login

* Rename and small edits

* Recompiling pyuic

* Rename config check and small fixes

* Rename create coll widget
* Initial setup

* Fix irods tree model

* Fixed irods tree

* Build in create dir/coll buttons

* Sync in threads

* Pylint

* Default error as loglevel

* Error messages

* Create new irods sessions in the single QThreads.

* Little bug fix

* Catch error when thread session cannot be established.

* Do not pylint the ui_files

* A monster push with a lot of formatting by ruff

* Fix small bug

* More changes

* pylint and cleanup

---------

Co-authored-by: Staiger, Christine <christine.staiger@wur.nl>
* Add userdoc github pages

* Formatting

* More edits

* tignore extended

* Add sync to userdoc.

* Bind to one ibridges version.

* have the backup

* Setup lintiers

* Move exclude of pyqt6 to MASTER

* Next try

* Exclude error pyproject.toml for pylint

* Exclude E0401, E0611

* Add E0611
Bumps [pyinstaller](https://github.com/pyinstaller/pyinstaller) from 6.6.0 to 6.7.0.
- [Release notes](https://github.com/pyinstaller/pyinstaller/releases)
- [Changelog](https://github.com/pyinstaller/pyinstaller/blob/develop/doc/CHANGES.rst)
- [Commits](pyinstaller/pyinstaller@v6.6.0...v6.7.0)

---
updated-dependencies:
- dependency-name: pyinstaller
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
@chStaiger chStaiger merged commit cfa8e7c into main May 29, 2024
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