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SKeleton Oriented ObjecT Segmentation (SKOOTS) - instance segmentation of large, densely packed objects in biomedical images

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SKOOTS

SKeletOn ObjecT Segmentation - 2D/3D instance segmentation of arbitrary biomedical images.

To install, make sure pyTorch is installed with CUDA support.

pip install skoots

Documentation: skoots.readthedocs.io

BioRxiv: soon...

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SKeleton Oriented ObjecT Segmentation (SKOOTS) - instance segmentation of large, densely packed objects in biomedical images

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