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small bugfix #48

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small bugfix #48

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8 changes: 4 additions & 4 deletions src/iblphotometry/qc.py
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Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@

from iblphotometry.processing import make_sliding_window
from iblphotometry.pipelines import run_pipeline
from brainbox.io.one import SessionLoader

Check failure on line 13 in src/iblphotometry/qc.py

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Ruff (F401) 

src/iblphotometry/qc.py:13:29: F401 `brainbox.io.one.SessionLoader` imported but unused

logger = logging.getLogger()

Expand Down Expand Up @@ -65,7 +65,7 @@
S = sliding_metric(
F, metric=metric, **sliding_kwargs, metric_kwargs=metric_kwargs
)
r, p = linregress(S.times(), S.values)[2:4]
r, p = linregress(S.index.values, S.values)[2:4]
else:
r = np.nan
p = np.nan
Expand Down Expand Up @@ -121,15 +121,15 @@

# get behavioral data
# TODO this should be provided
sl = SessionLoader(eid=eid, one=data_loader.one)
# sl = SessionLoader(eid=eid, one=data_loader.one)
# for caroline
# trials = sl.load_trials(
# collection='alf/task_00'
# ) # this is necessary fo caroline
trials = sl.load_trials() # should be good for all others
# trials = sl.load_trials() # should be good for all others

# the old way
# trials = data_loader.one.load_dataset(eid, '*trials.table.pqt')
trials = data_loader.one.load_dataset(eid, '*trials.table.pqt')

for band in signal_bands:
raw_tf = raw_dfs[band]
Expand Down
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