numpy-tiff-deepimagej

Test images (converted to tiff from numpy) for testing bioimage.io models in DeepImageJ

Contents of the folders

Every model (resource_id, version) has a folder with 4 files:

• input_shape.edn
• output_shape.edn
• sample_input_0.tif
• sample_output_0.tif

Contents of this repository

$ du -h --max-depth=2
118M    ./.git
8.1M    ./10.5281/zenodo.5749843
1.2M    ./10.5281/zenodo.5764892
522K    ./10.5281/zenodo.5817052
6.1M    ./10.5281/zenodo.5847355
6.8M    ./10.5281/zenodo.5869899
20M     ./10.5281/zenodo.5874741
37M     ./10.5281/zenodo.5874841
3.2M    ./10.5281/zenodo.5914248
19M     ./10.5281/zenodo.6028097
21M     ./10.5281/zenodo.6028280
13M     ./10.5281/zenodo.6200999
22M     ./10.5281/zenodo.6338614
20M     ./10.5281/zenodo.6348084
3.1M    ./10.5281/zenodo.6348728
9.1M    ./10.5281/zenodo.6406756
2.3M    ./10.5281/zenodo.6406803
950K    ./10.5281/zenodo.6559474
17M     ./10.5281/zenodo.6808325
25M     ./10.5281/zenodo.6811491
228M    ./10.5281
950K    ./deepimagej/FRUNet2DsEVSegmentation
0       ./deepimagej/JonesVirtualStaining
0       ./deepimagej/Mt3VirtualStaining
0       ./deepimagej/UNet2DGlioblastomaSegmentation
0       ./deepimagej/UNet2DHeLaSegmentation
0       ./deepimagej/Usiigaci
0       ./deepimagej/WidefieldDapiSuperResolution
0       ./deepimagej/WidefieldFitcSuperResolution
0       ./deepimagej/WidefieldTxredSuperResolution
954K    ./deepimagej
12K     ./resources
18K     ./scripts/.idea
8.0K    ./scripts/__pycache__
4.1M    ./scripts
351M    .