read strings as factors #17
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name: downstream-tests-on-comment | |
# This workflow is triggered by the comment '/test-downstream' inside a PR | |
# The workflow then: | |
# 1. modifies the original comment into: | |
# """ | |
# /test-downstream | |
# | |
# Automatic edit: | |
# Running downstream tests for commit <commit>, follow the run [here](<link>). | |
# """ | |
# 2. runs the unit test of all common modules with the last commit before that comment | |
# 3. replies in a comment with which modules/ OSes failed (successes are omitted). | |
on: | |
issue_comment: | |
types: | |
- created | |
jobs: | |
pr-info: | |
if: ${{ github.event.issue.pull_request && github.event.comment.body == '/test-downstream'}} | |
runs-on: ubuntu-latest | |
outputs: | |
commit: ${{ steps.get-commit.outputs.commit }} | |
steps: | |
- name: Get PR info | |
id: get-pr-info | |
uses: actions/github-script@v5 | |
with: | |
script: | | |
const { owner, repo, number } = context.issue; | |
const pr = await github.rest.pulls.get({ | |
owner, | |
repo, | |
pull_number: number, | |
}); | |
// console.log(pr) // for debugging | |
return pr | |
- name: Print metadata and set PR SHA | |
id: get-commit | |
env: | |
pr_info: ${{ steps.get-pr-info.outputs.result }} | |
run: | | |
# this step is mainly there for debugging | |
base=$(echo ${pr_info} | jq '.data["base"]["label"]') | |
head=$(echo ${pr_info} | jq '.data["head"]["label"]') | |
commit=$(echo ${pr_info} | jq -r '.data["head"]["sha"]') | |
printf '%-15s: %s\n' \ | |
repository ${{ github.event.repository.name }} \ | |
base ${base} \ | |
head ${head} \ | |
commit ${commit} \ | |
github.sha ${{ github.sha }} \ | |
comment ${{ github.event.comment.html_url }} \ | |
echo "::set-output name=commit::${commit}" | |
shell: bash | |
- name: Update initial comment | |
uses: actions/github-script@v5 | |
with: | |
script: | | |
body = "${{ github.event.comment.body }}".concat("\n\nAutomatic edit:\nRunning downstream tests for commit ${{ steps.get-commit.outputs.commit }}, follow the run [here](${{ github.server_url }}/${{ github.repository }}/actions/runs/${{ github.run_id }})."); | |
console.log(body); | |
github.rest.issues.updateComment({ | |
owner: context.repo.owner, | |
repo: context.repo.repo, | |
comment_id: ${{ github.event.comment.id }}, | |
body: body | |
}); | |
unit-tests: | |
runs-on: ${{ matrix.os }} | |
# this might not be necessary, but it's more user friendly if the comment is edited first (otherwise pr-info and unit-tests run concurrently). | |
needs: pr-info | |
continue-on-error: true | |
name: ${{ matrix.os }} (${{ matrix.r }} (${{ matrix.module }}) | |
strategy: | |
fail-fast: false | |
matrix: | |
r: [4.3.1] | |
os: [ubuntu-latest, macOS-latest, windows-latest] | |
# only common modules | |
module: [jasp-stats/jaspDescriptives, jasp-stats/jaspTTests, jasp-stats/jaspAnova, jasp-stats/jaspRegression, jasp-stats/jaspFrequencies, jasp-stats/jaspFactor] | |
# for debugging | |
# os: [ubuntu-latest] | |
# module: [jasp-stats/jaspDescriptives, jasp-stats/jaspTTests] | |
# # outputs is generated with the following R code. It does not matter if some outputs are unused. | |
# oses <- c("ubuntu-latest", "macOS-latest", "windows-latest") | |
# modules <- c("jasp-stats/jaspDescriptives", "jasp-stats/jaspTTests", "jasp-stats/jaspAnova", "jasp-stats/jaspRegression", "jasp-stats/jaspFrequencies", "jasp-stats/jaspFactor") | |
# base <- " %1$s-%2$s: ${{ steps.update-output.outputs.%1$s-%2$s }}" | |
# for (os in oses) for (module in modules) | |
# cat(sprintf(base, os, basename(module)), "\n") | |
outputs: | |
ubuntu-latest-jaspDescriptives: ${{ steps.update-output.outputs.ubuntu-latest-jaspDescriptives }} | |
ubuntu-latest-jaspTTests: ${{ steps.update-output.outputs.ubuntu-latest-jaspTTests }} | |
ubuntu-latest-jaspAnova: ${{ steps.update-output.outputs.ubuntu-latest-jaspAnova }} | |
ubuntu-latest-jaspRegression: ${{ steps.update-output.outputs.ubuntu-latest-jaspRegression }} | |
ubuntu-latest-jaspFrequencies: ${{ steps.update-output.outputs.ubuntu-latest-jaspFrequencies }} | |
ubuntu-latest-jaspFactor: ${{ steps.update-output.outputs.ubuntu-latest-jaspFactor }} | |
macOS-latest-jaspDescriptives: ${{ steps.update-output.outputs.macOS-latest-jaspDescriptives }} | |
macOS-latest-jaspTTests: ${{ steps.update-output.outputs.macOS-latest-jaspTTests }} | |
macOS-latest-jaspAnova: ${{ steps.update-output.outputs.macOS-latest-jaspAnova }} | |
macOS-latest-jaspRegression: ${{ steps.update-output.outputs.macOS-latest-jaspRegression }} | |
macOS-latest-jaspFrequencies: ${{ steps.update-output.outputs.macOS-latest-jaspFrequencies }} | |
macOS-latest-jaspFactor: ${{ steps.update-output.outputs.macOS-latest-jaspFactor }} | |
windows-latest-jaspDescriptives: ${{ steps.update-output.outputs.windows-latest-jaspDescriptives }} | |
windows-latest-jaspTTests: ${{ steps.update-output.outputs.windows-latest-jaspTTests }} | |
windows-latest-jaspAnova: ${{ steps.update-output.outputs.windows-latest-jaspAnova }} | |
windows-latest-jaspRegression: ${{ steps.update-output.outputs.windows-latest-jaspRegression }} | |
windows-latest-jaspFrequencies: ${{ steps.update-output.outputs.windows-latest-jaspFrequencies }} | |
windows-latest-jaspFactor: ${{ steps.update-output.outputs.windows-latest-jaspFactor }} | |
env: | |
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
steps: | |
- uses: actions/checkout@v2 | |
with: | |
ref: ${{ needs.pr-info.outputs.commit }} | |
- uses: r-lib/actions/setup-r@master | |
with: | |
r-version: ${{ matrix.r }} | |
- name: clone module ${{ matrix.module }} | |
run: git clone "https://github.com/${{ matrix.module }}.git" | |
shell: bash | |
- uses: jasp-stats/jasp-actions/setup-test-env@master | |
- name: Install igraph from source | |
if: ${{ matrix.os == 'ubuntu-latest' && matrix.module == 'jasp-stats/jaspFactor' }} | |
run: install.packages("igraph", type = "source", repos = "https://cloud.r-project.org") | |
shell: Rscript {0} | |
- name: Install ${{ github.event.repository.name }} | |
run: | | |
remotes::install_local(".") | |
jaspTools::setupJaspTools(force = FALSE) | |
shell: Rscript {0} | |
- name: Run unit tests | |
run: | | |
setwd(basename("${{ matrix.module }}")) | |
source("tests/testthat.R") | |
shell: Rscript {0} | |
# - name: fake unit tests for debugging | |
# run: | | |
# if [ ${{ matrix.module }} == 'jasp-stats/jaspDescriptives' ]; then | |
# exit 1 | |
# fi | |
# shell: bash | |
- name: set error if tests fail | |
id: update-output | |
if: ${{ failure() }} | |
run: | | |
moduleName=$(basename ${{ matrix.module }}) | |
nm="${{ matrix.os }}-${moduleName}" | |
echo "nm = $nm" | |
echo "::set-output name=${nm}::error" | |
shell: bash | |
report-results: | |
runs-on: ubuntu-latest | |
needs: [pr-info, unit-tests] | |
steps: | |
- name: Aggregate results & post comment output | |
id: aggregated-results | |
env: | |
NEEDS: ${{ toJSON(needs) }} | |
uses: actions/github-script@v5 | |
with: | |
script: | | |
const { NEEDS } = process.env | |
console.log(`${NEEDS}`) | |
results=JSON.parse(NEEDS); | |
console.log(results) | |
outputs=results["unit-tests"]["outputs"]; | |
for (const prop in outputs) { console.log(`${prop}: ${outputs[prop]}`);} | |
if (Object.keys(outputs).length === 0) { | |
console.log("All downstream tests succeeded") | |
body = "All downstream tests for commit ${{ needs.pr-info.outputs.commit }} succeeded! ✅" | |
} else { | |
console.log("Some unit tests failed") | |
obj = {}; // dict from module to os | |
for (const key in outputs) { | |
var [os, module] = key.split(/\-(?=[^\-]+$)/); | |
console.log(os, "|", module) | |
if (!(module in obj)) | |
obj[module] = new Set(); | |
obj[module].add(os); | |
} | |
body = "The following downstream tests for commit ${{ needs.pr-info.outputs.commit }} failed:\n| Module | windows-latest | macOS-latest | ubuntu-latest |\n| ---: | :---: | :---: | :---: |" | |
oses = ["windows-latest", "macOS-latest", "ubuntu-latest"]; | |
for (const module in obj) { | |
str = "\n| ".concat(module, " | ", oses.map(os => obj[module].has(os) ? "❌" : "✅").join(" | ")); | |
body = body.concat(str); | |
console.log(body) | |
} | |
} | |
body = body.concat("\n\nThe full log is available [here](${{ github.server_url }}/${{ github.repository }}/actions/runs/${{ github.run_id }}).") | |
github.rest.issues.createComment({ | |
issue_number: context.issue.number, | |
owner: context.repo.owner, | |
repo: context.repo.repo, | |
body: body, | |
}); |