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johannesnicolaus/README.md

Hi there 👋

  • 🔭 Starting my new work on comparative epigenomics in Oikopleura dioica. I previously worked with single-cell transcriptomics, epigenomics and fluorescence imaging analysis
  • 🏫 I'm doing my PhD at the Okinawa Institute of Science and Technology
  • 🌱 I’m currently learning about python, web development, 3D printing
  • 💬 Ask me about anything!
  • 📫 How to reach me: johannes.nicolaus@oist.jp or johannes.nicolaus@gmail.com
  • ⚡ Fun fact: I keep many carnivorous plants, my turtle was adopted by a friend

Nico's GitHub stats

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  1. okadalabipr/Wibisana2021 okadalabipr/Wibisana2021 Public

    Imaging and single cell sequencing analyses of super-enhancer activation mediated by NF-κB in B cells (Wibisana, JN et al., 2021)

    R 4

  2. rnaseq_viz rnaseq_viz Public

    Visualization of normalized RNA-seq data using R Shiny app

    R 1

  3. ASURAT ASURAT Public

    ASURAT: Functional annotation-driven unsupervised clustering of single-cell transcriptomes

    R

  4. findfoci findfoci Public

    ImageJ2 and R package for quantitative analysis of NF-κB foci

    ImageJ Macro 1