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A fast reverse proxy to help you expose a local server behind a NAT or firewall to the internet.

Go 88,869 13,574 Updated Jan 2, 2025

Predicting chromatin structure and developmental potential using single-cell chromatin accessibility

R 3 Updated Sep 29, 2024

Cell age determination by scATAC-seq and bulk-ATAC-seq

R 28 3 Updated Aug 28, 2024

SCTC: inference of developmental potential from single-cell transcriptional complexity

Jupyter Notebook 5 Updated Aug 16, 2024

An integrated package to process diploid Hi-C data

Python 15 3 Updated Dec 9, 2021

CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.

R 108 8 Updated Oct 14, 2024

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics

R 324 54 Updated Dec 11, 2024

A versatile tool to perform pile-up analysis on Hi-C data in .cool format.

Python 78 12 Updated Oct 31, 2024

python module to plot beautiful and highly customizable genome browser tracks

Python 782 115 Updated Jul 10, 2024
Perl 6 7 Updated Feb 3, 2023

🍺基于Django的博客系统

Python 6,763 2,727 Updated Jan 1, 2025

The database for spatially resolved transcriptomics

R 7 3 Updated Aug 25, 2024

PhyloVelo, Phylogeny-based transcriptomic velocity of single cells

Python 41 4 Updated Nov 7, 2023

Feature-weight based measurement of cancerous transcriptome using cohort-wide and sample-specific information

R 2 Updated Oct 10, 2023

Estimation of Single-Cell Potency with Single Cell Entropy

R 38 9 Updated Apr 12, 2023

SPRINT2

Python 2 1 Updated May 9, 2023

Automatic and optimised consensus clustering of one or more heterogeneous datasets

Python 164 36 Updated Oct 31, 2022
R 157 25 Updated Aug 30, 2024

InferLoop: leveraging single-cell chromatin accessibility for the signal of chromatin loop

R 3 Updated Jun 12, 2023

Deep learning-based tissue compositions and cell-type-specific gene expression analysis with tissue-adaptive autoencoder (TAPE)

Jupyter Notebook 49 9 Updated Apr 3, 2024

Python client for Baidu Yun (Personal Cloud Storage) 百度云/百度网盘Python客户端

Python 8,012 1,403 Updated May 1, 2024

ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)

R 390 140 Updated Dec 30, 2024

Bioinformatics pipeline for single-cell 3' UTR isoform quantification

Python 16 4 Updated Nov 20, 2024

A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot

R 68 16 Updated Dec 9, 2024

FitDevo: accurate inference of single-cell developmental potential using sample-specific gene weight

R 15 2 Updated Apr 7, 2024

parallel fastq-dump wrapper

Python 286 34 Updated Apr 26, 2023
Python 11 8 Updated Apr 30, 2024
Java 13 2 Updated Jan 1, 2022

Computing statistics for overlapping sets of intervals

C++ 6 2 Updated Aug 30, 2022
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