documentation targets related modifications to Makefile and mkdocs

Makefile

@@ -23,6 +23,7 @@ DEST = project
 PYMODEL = $(SRC)/$(SCHEMA_NAME)/datamodel
 DOCDIR = docs
 EXAMPLEDIR = examples
+TEMPLATEDIR = doc-templates
 SHEET_MODULE = personinfo_enums
 SHEET_ID = $(LINKML_SCHEMA_GOOGLE_SHEET_ID)
 SHEET_TABS = $(LINKML_SCHEMA_GOOGLE_SHEET_TABS)
@@ -199,8 +200,12 @@ $(DOCDIR):
 	mkdir -p $@
 
 gendoc: $(DOCDIR)
-	cp -rf $(SRC)/docs/* $(DOCDIR) ; \
-	$(RUN) gen-doc ${GEN_DOC_ARGS} -d $(DOCDIR) $(SOURCE_SCHEMA_PATH)
+	# added copying of images and renaming of TEMP.md
+	cp $(SRC)/docs/*md $(DOCDIR) ; \
+	cp -r $(SRC)/docs/images $(DOCDIR) ; \
+	$(RUN) gen-doc -d $(DOCDIR) --template-directory $(SRC)/$(TEMPLATEDIR) $(SOURCE_SCHEMA_PATH)
+	mkdir -p $(DOCDIR)/javascripts
+	$(RUN) cp $(SRC)/scripts/*.js $(DOCDIR)/javascripts/
 
 testdoc: gendoc serve
 

mkdocs.yml

@@ -1,5 +1,5 @@
 ---
-site_name: "mifc"
+site_name: mifc
 theme:
   name: material
   # palette:
@@ -12,6 +12,13 @@ plugins:
   - mermaid2
   - mermaid2:
       version: 10.9.0
+markdown_extensions:
+  - admonition
+  - tables
+  - pymdownx.magiclink
+extra_javascript:
+  - https://unpkg.com/tablesort@5.3.0/dist/tablesort.min.js
+  - javascripts/tablesort.js
 nav:
   # - Home: home.md
   - Index: index.md