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Make tree structure uniform and add reconstruction progress statements

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@katiesaund katiesaund released this 22 Sep 15:49
· 16 commits to master since this release
  • Internal organization of tree structure is now always forced to "cladewise"
  • Ancestral reconstruction progress statements are made after completing AR for 25%, 50%, and 75% of the genotypes in addition to 100% completion. This is important to tracking progress on very large (slow) datasets.