v1.7.0

v1.7.0

This release brings important improvements:

• Much improved sensitivity, especially for long-read data at multi-allelic sites, or clustered SVs on the same haplotype
• Faster runtime
• New preset modes for pacbio-revio and nanopore-r10

Issues fixed:

• Overriding presets works as expected
• #114, #109

CLI changes:

• --no-gt flag has been removed
• --mode pacbio and --mode nanopore presets have been changed to --mode pacbio-sequel2 and --mode nanopore-r9
• Using run pipeline with long-reads (cram files) now applies compression to the temp bam file wb3