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ukbtools v0.10.0

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@kenhanscombe kenhanscombe released this 28 Nov 09:23
· 169 commits to master since this release

New functionality:

  • ukb_icd_freq_by returns frequency for one or more ICD diagnoses by levels of a reference variable and includes an optional plot

  • ukb_df_full_join (a thin wrapper around dplyr::full_join) recursively called on a list of UKB datasets

  • ukb_df_duplicated_names to identify duplicated names within a dataset. The variable prefix (constructed from its description), index, and array should make the column name unique. However, typos in UKB documentation that give two variables the do not increment index/array have been observed. You will want to identify these and update them appropriately. We expect the occurrence of such duplicates will be rare.

Updated functionality:

  • ukb_icd_diagnosis now takes one or more individual ids and returns a dataframe with a potential message noting ids with no diagnoses

  • ukb_icd_keyword accepts a character vector of one or more "keywords" and returns all ICD descriptions including any of the keywords