Run Jupyter Notebook and Create Release #6

	name: Run Jupyter Notebook and Create Release

	on:
	workflow_dispatch:

	jobs:
	run-notebook:
	runs-on: ubuntu-latest

	steps:
	- name: Checkout repository
	uses: actions/checkout@v2

	- name: Set up Python
	uses: actions/setup-python@v2
	with:
	python-version: '3.11'

	- name: Install `uv`
	run: \|
	pip install uv

	- name: make venv with uv
	run: \|
	uv venv

	- name: Activate venv and Install dependencies
	run: \|
	source .venv/bin/activate
	uv pip install -r requirements.txt

	- name: Run Jupyter Notebook
	run: \|
	source .venv/bin/activate
	jupyter nbconvert --to notebook --execute omim_vs_orphanet_comparison.ipynb --output omim_vs_orphanet_comparison_output.ipynb

	- name: Get Date for Release Tag
	run: echo "DATE=$(date +%Y-%m-%d)" >> $GITHUB_ENV

	- name: Create Release
	uses: softprops/action-gh-release@v2
	with:
	tag_name: ${{ env.DATE }}
	files: \|
	output/*
	generate_release_notes: true
	draft: true

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