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@kishwarshafin kishwarshafin released this 26 Aug 21:31
· 3 commits to r0.5 since this release

Updates in Oxford Nanopore variant calling in V0.5:

Reduce search space of PEPPER by only predicting on sites with variants
Adding CNN layers on top of RNNs to improve predictions
Remove PEPPER HP from the pipeline
Support rows model for DeepVariant that uses alt alignment which significantly improves INDEL performance.
Support for Guppy 5.0.7 and high-accuracy mode of Guppy.