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This repository has been archived by the owner on Nov 26, 2023. It is now read-only.

v0.4.0
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@kushalkolar kushalkolar released this 27 Nov 02:36
· 214 commits to master since this release
v0.4.0
8ac530c

New

  • Bokeh based plots that use a bokeh-based datapoint tracer, still in very early stages
  • k-Shape "gridsearch", select a n-partitions range and number of combinations, returns heatmap of all k-Shape runs with inertia values
    NOTE: The gridsearch is not saved when the plot is saved. Only the chosen kshape iteration will be saved. This will be fixed in a future release
  • Plot neural dynamics in PCA or LDA space
  • PadArrays flowchart node to pad dataframe arrays when sizes don't match, useful when splicing is undesired
  • View mean, max, or std projection of caiman motion correction outputs by selecting them from the batch manager

Modified

  • CNME Viewer module uses CNMFParams when running batch items instead of passing the params are args directly to CNMF.__init__()
  • Improved performance when importing a project dataframe in the flowchart
  • The project curves dir is deprecated. Backwards compatibility is maintained
  • Project browser supports filtering of list-type columns, such as stimulus/behavioral names
  • Use tslearn v0.4
  • Lots of bug fixes everywhere
  • Fix finding (newer?) CUDA GPUs
  • Fix bug with stimtuning plot if only one stim type is present
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