A knowledge graph system with graph neural network for drug discovery, disease mechanism, biomarker screening and discovering response to toxicant exposure.
- Knowledge graph studio for graph query, visualization and analysis.
- Graph neural network for drug discovery, disease mechanism, biomarker screening and discovering response to toxicant exposure.
- Support customized knowledge graph schema and data source.
- Support customized graph neural network model.
- Support customized omics datasets.
- Integrated large language models (such as vicuna, rwkv, chatgpt etc. more details on chat-publications) for answering questions.
Clone the repo and install dependencies.
git clone https://github.com/yjcyxky/biomedgps-studio.git
# Recommend using yarn and node v16.13.1
cd biomedgps-studio && yarnStart the frontend server.
# Use the remote backend
yarn start:remote-dev
# If you have launched the backend server locally, please use the following command.
# You can find the backend server code on [biomedgps](https://github.com/yjcyxky/biomedgps) or [rapex](https://github.com/yjcyxky/rapex)
yarn start:local-dev
# Release it to GitHub
yarn build && yarn gh-pagesCopyright © 2022 Jingcheng Yang
This program and the accompanying materials are made available under the terms of the Eclipse Public License 2.0 which is available at http://www.eclipse.org/legal/epl-2.0.
This Source Code may also be made available under the following Secondary Licenses when the conditions for such availability set forth in the Eclipse Public License, v. 2.0 are satisfied: GNU General Public License as published by the Free Software Foundation, either version 2 of the License, or (at your option) any later version, with the GNU Classpath Exception which is available at https://www.gnu.org/software/classpath/license.html.