The present repo contains the code associated with the de la Cuesta-Zuluaga et al., 2023 manuscript:
Obesity is the main driver of altered gut microbiome functions in the metabolically unhealthy. Jacobo de la Cuesta-Zuluaga, Kelsey E. Huus, Nicholas D. Youngblut, Juan S. Escobar & Ruth E. Ley. (2023).
The metagenomic sequence data generated during this study have been deposited in the European Nucleotide Archive with accession ID PRJEB58436.