rgoslin release 1.0.2

rgoslin Release 1.0.2

This project is a parser, validator and normalizer implementation for shorthand lipid nomenclatures, based on the Grammar of Succinct Lipid Nomenclatures project.

Goslin defines multiple grammers compatible with ANTLRv4 for different sources of shorthand lipid nomenclature. This allows to generate parsers based on the defined grammars, which provide immediate feedback whether a processed lipid shorthand notation string is compliant with a particular grammar, or not.

rgoslin uses the Goslin grammars and the generated parser to support the following general tasks:

• Facilitate the parsing of shorthand lipid names dialects.
• Provide a structural representation of the shorthand lipid after parsing.
• Use the structural representation to generate normalized names.

Changelog

Changes in 1.0.2

• Fixed build issues with clang/llvm on OS X, following Release 1.0.1 of cppgoslin.

Getting Started

Please check the README for instructions on how to install and use rgoslin.

Related Projects

• Goslin grammars and test files
• Java implementation
• C++ implementation
• Python implementation
• R implementation
• Webapplication and REST API

Help & Support

If you experience any issues with rgoslin, we kindly ask you to report them
using our support form at https://lifs.isas.de/support with the support category
'General'. Please include your Operating System and your R version (if
applicable).

Source Code

rgoslin's source code is available at https://github.com/lifs-tools/rgoslin.