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Added a test to demonstrate mapping Allen Brain Atlas json to OWL #18

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merged 2 commits into from
Mar 4, 2022

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@cmungall cmungall commented Mar 3, 2022

Two steps

  • (1) map to the JSON to a formal schema (independent of OWL)
  • (2) provide mappings in schema to OWL interpretations

TODO: the solution of hardcoding a prefix for the integer id->iri is not ideal

Addresses obophenotype/ABA_Uberon#9

Two steps (1) map to the JSON to a formal schema (independent of OWL)
(2) provide mappings in schema to OWL interpretations
TODO: the solution of hardcoding a prefix for the integer id->iri is not
ideal
Addresses obophenotype/ABA_Uberon#9
@cmungall cmungall changed the title Added a test to demonstrate mapping Allen Brain Atlas json to OWL. Two steps (1) map to the JSON to a formal schema (independent of OWL) (2) provide mappings in schema to OWL interpretations TODO: the solution of hardcoding a prefix for the integer id->iri is not ideal Addresses https://github.com/obophenotype/ABA_Uberon/issues/9 Added a test to demonstrate mapping Allen Brain Atlas json to OWL Mar 3, 2022
@cmungall cmungall merged commit e316134 into main Mar 4, 2022
@cmungall cmungall deleted the allen-test branch March 4, 2022 06:03
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