Merge pull request #22 from linkml/add-neo4j-bindings

add neo4j bindings
linkml · Aug 2, 2024 · 6b1b6d2 · 6b1b6d2
2 parents 48c6a08 + 1e65718
commit 6b1b6d2
Show file tree

Hide file tree

Showing 18 changed files with 3,525 additions and 991 deletions.
diff --git a/docs/how-to/Use-Neo4J.ipynb b/docs/how-to/Use-Neo4J.ipynb
diff --git a/docs/how-to/input/movies_kg/diagrams/MoviesKG.svg b/docs/how-to/input/movies_kg/diagrams/MoviesKG.svg
diff --git a/docs/how-to/input/movies_kg/edges.csv b/docs/how-to/input/movies_kg/edges.csv
@@ -0,0 +1,7 @@
+subject,predicate,object,plays
+PERSON:TH,ActedIn,MOVIE:FG,CHARACTER:Forrest
+PERSON:RZ,Directed,MOVIE:FG,
+PERSON:RZ,Directed,MOVIE:BTTF,
+PERSON:KR,ActedIn,MOVIE:TM,CHARACTER:Neo
+PERSON:MJF,ActedIn,MOVIE:BTTF,CHARACTER:MartyMcFly
+PERSON:HW,ActedIn,MOVIE:TM,CHARACTER:AgentSmith
diff --git a/docs/how-to/input/movies_kg/nodes.csv b/docs/how-to/input/movies_kg/nodes.csv
@@ -0,0 +1,11 @@
+id,category,name,born,released
+PERSON:TH,Actor,Tom Hanks,1956,
+PERSON:RZ,Director,Robert Zemeckis,1951,
+PERSON:HW,Actor,Hugo Weaving,1960,
+PERSON:KR,Actor,Keanu Reeves,1964,
+PERSON:MJF,Actor,Michael J. Fox,1961,
+MOVIE:FG,Movie,Forrest Gump,,1994
+MOVIE:TM,Movie,The Matrix,,1999
+MOVIE:TM2,Movie,The Matrix Reloaded,,2003
+MOVIE:TM3,Movie,The Matrix Revolutions,,2003
+MOVIE:BTTF,Movie,Back to the Future,,1985
diff --git a/docs/how-to/input/movies_kg/schema.yaml b/docs/how-to/input/movies_kg/schema.yaml
@@ -0,0 +1,153 @@
+name: MoviesKG
+description: Information about movies, organized as a Property Graph
+id: https://w3id.org/linkml/examples/movieskg
+imports:
+- linkml:types
+prefixes:
+  sdo: http://schema.org/
+  movieskg: https://w3id.org/linkml/examples/movieskg/
+  linkml: https://w3id.org/linkml/
+  rdfs: http://www.w3.org/2000/01/rdf-schema#
+default_prefix: movieskg
+default_range: string
+enums:
+  ProfessionType:
+    description: profession/occupation vocabulary
+    from_schema: https://w3id.org/linkml/examples/movieskg
+    permissible_values:
+      Actor:
+        description: acts in movies
+      Director:
+        description: directs
+      Producer:
+        description: produces or exec produces
+      CostumeDesigner:
+        description: makes the costumes
+slots:
+  id:
+    description: unique CURIE identifier
+    identifier: true
+    range: uriorcurie
+  name:
+    description: human-readable name/label
+    slot_uri: rdfs:label
+    range: string
+  category:
+    slot_uri: rdf:type
+    designates_type: true
+    range: string
+  aliases:
+    range: string
+    multivalued: true
+  born:
+    range: integer
+  released:
+    range: integer
+  subject:
+    slot_uri: rdf:subject
+    range: Node
+  predicate:
+    comments:
+      - Note that this uniquely identifiers the (reified) class
+    slot_uri: rdf:predicate
+    designates_type: true
+    range: string
+    required: true
+  object:
+    slot_uri: rdf:objects
+    range: Node
+  nodes:
+    from_schema: https://w3id.org/linkml/examples/movieskg
+  edges:
+    from_schema: https://w3id.org/linkml/examples/movieskg
+  professions:
+    from_schema: https://w3id.org/linkml/examples/movieskg
+  address:
+    from_schema: https://w3id.org/linkml/examples/movieskg
+  plays:
+    from_schema: https://w3id.org/linkml/examples/movieskg
+  scored_by:
+    from_schema: https://w3id.org/linkml/examples/movieskg
+classes:
+  Node:
+    description: A node/vertex in a graph
+    from_schema: https://w3id.org/linkml/examples/movieskg
+    slots:
+    - id
+    - name
+    - category
+    - aliases
+
+  Edge:
+    description: An edge/triple in a graph.
+    comments:
+    - May be subclassed to add edge properties. This is a property graph data model,
+      so edges are instances
+    from_schema: https://w3id.org/linkml/examples/movieskg
+    slots:
+    - subject
+    - predicate
+    - object
+    class_uri: rdfs:Statement
+  Graph:
+    description: A collection of nodes and edges
+    from_schema: https://w3id.org/linkml/examples/movieskg
+    slots:
+    - nodes
+    - edges
+    slot_usage:
+      nodes:
+        description: list of all nodes in the graph
+        range: Node
+        multivalued: true
+        inlined_as_list: true
+      edges:
+        description: list of all edges in the graph
+        range: Edge
+        multivalued: true
+        inlined_as_list: true
+  Person:
+    description: a person living or dead
+    from_schema: https://w3id.org/linkml/examples/movieskg
+    is_a: Node
+    slots:
+    - professions
+    - born
+    slot_usage:
+      professions:
+        description: jobs/roles
+        range: ProfessionType
+        multivalued: true
+  CreativeWork:
+    description: A creative work like a movie
+    from_schema: https://w3id.org/linkml/examples/movieskg
+    is_a: Node
+  Movie:
+    from_schema: https://w3id.org/linkml/examples/movieskg
+    is_a: CreativeWork
+    slots:
+      - released
+  Character:
+    from_schema: https://w3id.org/linkml/examples/movieskg
+    is_a: CreativeWork
+  ActedIn:
+    from_schema: https://w3id.org/linkml/examples/movieskg
+    is_a: Edge
+    slots:
+    - plays
+    slot_usage:
+      subject:
+        range: Person
+      object:
+        range: Movie
+      plays:
+        description: The character or characters played by the subject (actor)
+        range: Character
+  Directed:
+    from_schema: https://w3id.org/linkml/examples/movieskg
+    is_a: Edge
+    slot_usage:
+      subject:
+        range: Person
+      object:
+        range: Movie