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MoBamPlot

Documentation Status Updates

A tool to create interactive graphs and plot bam read density at specific loci.

  • Free software: MIT license
  • For documentation, see the home page on ReadtheDocs.

Introduction

mobamplot is a Python based tool used for genomic analysis. It was written by Monika Perez in Charles Y. Lin's lab at BCM, initially to create a replacement for BamPlot.

This package provides:

  1. A set of scripts to visualize sequencing data.
  2. A set of example input and output files.

Installation

mobamplot can be installed using pip using the following code. MoBamPlot requires that plastid be installed after i.e.:

$ pip install git+https://github.com/linlabcode/mobamplot.git#egg=mobamplot

$ pip install plastid

Credits

This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.

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