Update doc fxy #69
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| # Build SEIMS on macOS using AppleClang | |
| name: Build on macOS using AppleClang | |
| on: | |
| push: | |
| branches: | |
| - dev | |
| paths-ignore: | |
| - 'data' | |
| - 'knowledge' | |
| pull_request: | |
| branches: | |
| - dev | |
| paths-ignore: | |
| - 'data' | |
| - 'knowledge' | |
| workflow_dispatch: | |
| env: | |
| # Customize the CMake build type here (Release, Debug, RelWithDebInfo, etc.) | |
| BUILD_TYPE: Release | |
| jobs: | |
| build-mac: | |
| runs-on: macos-latest | |
| steps: | |
| - name: Setup xcode | |
| uses: maxim-lobanov/setup-xcode@v1 | |
| # Default MongoBD was preinstalled on macos-12 and macos-11, | |
| # currently, use https://github.com/ankane/setup-mongodb on macos-13 and macos-14 (latest) | |
| - name: Setup MongoDB | |
| uses: ankane/setup-mongodb@v1 | |
| with: | |
| mongodb-version: 7.0 | |
| - name: Run MongoDB | |
| run: mongosh --eval "db.version()" | |
| - name: Install mongo-c-driver | |
| run: brew install mongo-c-driver | |
| - name: Install GDAL | |
| run: brew list gdal &>/dev/null || brew install gdal | |
| - name: Setup MSMPI | |
| uses: mpi4py/setup-mpi@v1 | |
| with: | |
| mpi: openmpi | |
| - name: Checkout SEIMS | |
| uses: actions/checkout@v4 | |
| - name: Configure CMake | |
| run: cmake -B ${{github.workspace}}/build -DCMAKE_BUILD_TYPE=${{env.BUILD_TYPE}} | |
| - name: Build and Install SEIMS | |
| run: | | |
| cmake --build ${{github.workspace}}/build --config ${{env.BUILD_TYPE}} -- -j 4 | |
| cmake --install ${{github.workspace}}/build --config ${{env.BUILD_TYPE}} | |
| - name: Cache conda | |
| uses: actions/cache@v4 | |
| env: | |
| # Increase this value to reset cache if etc/example-environment.yml has not changed | |
| CACHE_NUMBER: 0 | |
| with: | |
| path: ~/conda_pkgs_dir | |
| key: | |
| ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-${{ hashFiles('seims/pyseims_env.yml') }} | |
| - uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| activate-environment: pyseims | |
| environment-file: seims/pyseims_env.yml | |
| miniconda-version: "latest" | |
| auto-activate-base: true | |
| auto-update-conda: true | |
| use-only-tar-bz2: true # IMPORTANT: This needs to be set for caching to work properly! | |
| - name: Run SEIMS on demo data | |
| shell: bash -el {0} | |
| run: | | |
| #conda info | |
| #conda list | |
| #printenv | sort | |
| cd seims | |
| python pyseims_check.py | |
| cd test | |
| python demo_preprocess.py -name youwuzhen | |
| python demo_runmodel.py -name youwuzhen | |
| python demo_postprocess.py -name youwuzhen | |
| python -m scoop -n 2 demo_parameters_sensitivity.py -name youwuzhen | |
| python -m scoop -n 2 demo_calibration.py -name youwuzhen | |
| python -m scoop -n 2 demo_scenario_analysis.py -name youwuzhen |