HMM fix resampling state sequence, updated documentation for developers #215

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Run time

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Job	Run time
lint	29s
test (3.8, windows-latest)	6m 59s
test (3.8, ubuntu-latest)	5m 12s
test (3.9, windows-latest)	6m 49s
test (3.9, ubuntu-latest)	5m 26s
test (3.10, windows-latest)	6m 32s
test (3.10, ubuntu-latest)	4m 58s
test (3.11, windows-latest)	6m 23s
test (3.11, ubuntu-latest)	5m 0s
	47m 48s