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Add lammps example

Add lammps example #3

Triggered via push August 2, 2023 15:37
Status Failure
Total duration 37m 34s
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notebooks.yml

on: push
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1 error and 2 warnings
build
The process '/usr/share/miniconda/condabin/conda' failed with exit code 1
build
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
build
UnsatisfiableError: The following specifications were found to be incompatible with each other: Output in format: Requested package -> Available versions Package joblib conflicts for: structuretoolkit=0.0.6 -> pymatgen[version='>=2023.7.20'] -> joblib[version='>=1.1.1'] mp-api=0.33.3 -> pymatgen[version='>=2022.3.7'] -> joblib pymatgen=2023.7.20 -> joblib scikit-learn=1.3.0 -> joblib[version='>=1.1.1'] Package libcurl conflicts for: lammps -> hdf5[version='>=1.12.1,<1.12.2.0a0'] -> libcurl[version='>=7.81.0,<9.0a0|>=7.82.0,<9.0a0'] h5py=3.9.0 -> hdf5[version='>=1.14.1,<1.14.2.0a0'] -> libcurl[version='>=7.87.0,<9.0a0|>=8.1.2,<9.0a0|>=7.88.1,<9.0a0'] lammps -> libcurl[version='>=7.71.1,<9.0a0|>=7.77.0,<9.0a0|>=7.78.0,<9.0a0|>=7.79.1,<9.0a0|>=7.80.0,<9.0a0|>=7.83.0,<9.0a0|>=7.83.1,<9.0a0|>=7.85.0,<9.0a0|>=7.86.0,<9.0a0|>=7.87.0,<9.0a0|>=7.88.0,<9.0a0|>=7.88.1,<9.0a0|>=8.0.1,<9.0a0|>=8.1.0,<9.0a0|>=8.1.2,<9.0a0'] pyiron_base=0.6.3 -> git -> libcurl[version='>=7.57.0,<9.0a0|>=7.58.0,<9.0a0|>=7.59.0,<9.0a0|>=7.60.0,<9.0a0|>=7.61.0,<9.0a0|>=7.61.1,<9.0a0|>=7.63.0,<9.0a0|>=7.65.3,<9.0a0|>=7.80.0,<9.0a0|>=7.88.1,<9.0a0'] Package pypy3.9 conflicts for: matplotlib-base=3.7.2 -> pypy3.9[version='>=7.3.11'] scipy=1.11.1 -> numpy[version='>=1.21.6,<1.28'] -> pypy3.9[version='7.3.*|7.3.11.*|>=7.3.9|7.3.9.*|7.3.8.*'] scipy=1.11.1 -> pypy3.9[version='>=7.3.11'] pyscal=2.10.18 -> pypy3.9[version='>=7.3.11|>=7.3.9'] numpy=1.24.3 -> python[version='>=3.9,<3.10.0a0'] -> pypy3.9[version='7.3.*|7.3.11.*|7.3.9.*|7.3.8.*|>=7.3.9'] pyiron_base=0.6.3 -> numpy[version='>=1.19.5'] -> pypy3.9[version='7.3.11.*|>=7.3.11|>=7.3.9|>=7.3.8|7.3.9.*|7.3.8.*'] matplotlib-base=3.7.2 -> certifi[version='>=2020.06.20'] -> pypy3.9[version='7.3.*|7.3.11.*|>=7.3.8|>=7.3.9|7.3.9.*|7.3.8.*'] h5py=3.9.0 -> numpy[version='>=1.21.6,<2.0a0'] -> pypy3.9[version='7.3.11.*|>=7.3.11|>=7.3.9|7.3.9.*|7.3.8.*|>=7.3.8'] seekpath=2.1.0 -> future[version='>=0.15'] -> pypy3.9[version='7.3.11.*|>=7.3.11|>=7.3.8|>=7.3.9|7.3.9.*|7.3.8.*'] pymatgen=2023.7.20 -> frozendict -> pypy3.9[version='7.3.11.*|>=7.3.11|>=7.3.9|7.3.9.*|7.3.8.*|>=7.3.8'] pandas=2.0.3 -> numpy[version='>=1.21.6,<2.0a0'] -> pypy3.9[version='7.3.*|7.3.11.*|>=7.3.9|7.3.9.*|7.3.8.*'] pint=0.22 -> python[version='>=3.9'] -> pypy3.9[version='7.3.11.*|7.3.9.*|7.3.8.*'] phonopy=2.20.0 -> matplotlib-base -> pypy3.9[version='7.3.11.*|>=7.3.11|>=7.3.9|>=7.3.8|7.3.9.*|7.3.8.*'] ase=3.22.1 -> matplotlib-base -> pypy3.9[version='7.3.11.*|>=7.3.11|>=7.3.9|>=7.3.8|7.3.9.*|7.3.8.*'] coverage -> pypy3.9[version='>=7.3.11|>=7.3.9|>=7.3.8'] spglib=2.0.2 -> pypy3.9[version='>=7.3.11|>=7.3.9'] coveralls -> coverage[version='>=4.1,<7.0'] -> pypy3.9[version='7.3.11.*|>=7.3.8|>=7.3.9|7.3.9.*|7.3.8.*|>=7.3.11'] codacy-coverage -> python[version='>=3.5'] -> pypy3.9[version='7.3.11.*|7.3.9.*|7.3.8.*'] coverage -> python[version='>=3.9,<3.10.0a0'] -> pypy3.9[version='7.3.*|7.3.11.*|7.3.9.*|7.3.8.*'] lammps -> n2p2=2.2.0 -> pypy3.9[version='7.3.*|7.3.11.*|>=7.3.8|>=7.3.9|7.3.9.*|7.3.8.*'] numpy=1.24.3 -> pypy3.9[version='>=7.3.11'] spglib=2.0.2 -> numpy[version='>=1.20.3,<2.0a0'] -> pypy3.9[version='7.3.*|7.3.11.*|>=7.3.8|7.3.9.*|7.3.8.*'] structuretoolkit=0.0.6 -> matplotlib-base[version='>=3.7.2'] -> pypy3.9[version='7.3.11.*|>=7.3.11|>=7.3.9|>=7.3.8|7.3.9.*|7.3.8.*'] lammps -> pypy3.9[version='>=7.3.11'] defusedxml=0.7.1 -> python[version='>=3.6'] -> pypy3.9[version='7.3.11.*|7.3.9.*|7.3.8.*'] mendeleev=0.14.0 -> numpy -> pypy3.9[version='7.3.11.*|>=7.3.11|>=7.3.9|>=7.3.8|7.3.9.*|7.3.8.*'] mp-api=0.33.3 -> msgpack-python -> pypy3.9[version='7.3.11.*|>=7.3.11|>=7.3.9|>=7.3.8|7.3.9.*|7.3.8.*'] pandas=2.0.3 -> pypy3.9[version='>=7.3.11'] scikit-learn=1.3.0 -> numpy[version='>=1.21.6,<2.0a0'] -> pypy3.9[version='7.3.11.*|>=7.3.11|>=7.3.9|7.3.9.*|7.3.8.*'] pyscal=2.10.18 -> numpy[version='>=1.20.3,<2.0a0'] -> pypy3.9[version='7.3.*|7.3.11.*|>=7.3.8|7.3.9.*|7.3.8.*'] Package libgfortran5 conflicts for: phonopy=2.20.0 -> scipy -> libgfortran5[version='>=10.3.0|>=10.4.0|>=11.3.0|>=12.2.0|>=12.3.0|>=9.4.0|>=9.3.0|>=11.2.0'] ase=3.22.1 -> nump