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@metagenome-atlas

metagenome-atlas

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  1. atlas atlas Public

    ATLAS - Three commands to start analyzing your metagenome data

    Python 377 99

  2. Tutorial Tutorial Public

    A tutorial for Metagenome-Atlas

    MAXScript 23 13

Repositories

Showing 10 of 30 repositories
  • atlas Public

    ATLAS - Three commands to start analyzing your metagenome data

    metagenome-atlas/atlas’s past year of commit activity
    Python 377 BSD-3-Clause 99 4 8 Updated Dec 17, 2024
  • metagenome-assembly Public

    Workflow module for metagenome assembly

    metagenome-atlas/metagenome-assembly’s past year of commit activity
    Python 2 MIT 0 0 0 Updated Jun 25, 2024
  • snakemake-wrappers Public Forked from snakemake/snakemake-wrappers

    This is the development home of the Snakemake wrapper repository, see

    metagenome-atlas/snakemake-wrappers’s past year of commit activity
    CAP CDS 0 187 0 1 Updated Jan 15, 2024
  • Tutorial Public

    A tutorial for Metagenome-Atlas

    metagenome-atlas/Tutorial’s past year of commit activity
    MAXScript 23 GPL-3.0 13 4 2 Updated Nov 24, 2023
  • genecatalog_atlas Public

    Extended genecatalog workflow for metagenome-atlas

    metagenome-atlas/genecatalog_atlas’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Sep 27, 2023
  • genome-annotator Public
    metagenome-atlas/genome-annotator’s past year of commit activity
    Python 3 MIT 0 1 0 Updated Sep 27, 2023
  • supp_data_atlas Public

    Supplementary data for Atlas manuscript

    metagenome-atlas/supp_data_atlas’s past year of commit activity
    Jupyter Notebook 1 1 0 0 Updated Sep 27, 2023
  • plasmid_atlas Public
    metagenome-atlas/plasmid_atlas’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Sep 27, 2023
  • kingfisher_workflow Public Forked from trickovicmatija/kingfisher_workflow

    This is a workflow that allows you to download whole projects and metadata with kingfisher. Additionally, it takes care about merging same samples together.

    metagenome-atlas/kingfisher_workflow’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Aug 31, 2023
  • snake_gtdbtk Public

    A snakemake for GTDB-tk

    metagenome-atlas/snake_gtdbtk’s past year of commit activity
    Python 5 1 0 0 Updated Aug 31, 2023
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