Pull table notes from tex glossary files and yaml

DESCRIPTION

@@ -52,6 +52,7 @@ Collate:
     'data_inventory_table.R'
     'demographics-table.R'
     'discrete_table.R'
+    'glossary.R'
     'knit-dependencies.R'
     'preview-standalone.R'
     'preview.R'

NAMESPACE

@@ -1,19 +1,29 @@
 # Generated by roxygen2: do not edit by hand
 
+S3method("[",glossary)
+S3method(as.data.frame,glossary)
 S3method(as.list,digits)
+S3method(as.list,glossary)
+S3method(as.list,glossary_entry)
 S3method(as.panel,"NULL")
 S3method(as.panel,character)
 S3method(as.panel,quosures)
 S3method(as.panel,rowpanel)
 S3method(as_stable,pmtable)
 S3method(as_stable,stable)
 S3method(as_stable,stobject)
+S3method(c,glossary)
+S3method(glossary_notes,character)
+S3method(glossary_notes,glossary)
+S3method(glossary_notes,list)
 S3method(names,stobject)
 S3method(new_names,character)
 S3method(new_names,list)
 S3method(new_names,quosures)
 S3method(new_names,rowpanel)
 S3method(print,digits)
+S3method(print,glossary)
+S3method(print,glossary_entry)
 S3method(print,st_caption)
 S3method(print,stable_data)
 S3method(print,stobject)
@@ -38,6 +48,7 @@ export(.cols)
 export(as.caption)
 export(as.panel)
 export(as.span)
+export(as_glossary)
 export(as_lscape)
 export(as_stable)
 export(cat_data)
@@ -59,6 +70,7 @@ export(digit1)
 export(ensure_parens)
 export(find_bq_col)
 export(get_stable_data)
+export(glossary_notes)
 export(is.colgroup)
 export(is.colsplit)
 export(is.rowpanel)
@@ -80,8 +92,10 @@ export(pt_data_study)
 export(pt_demographics)
 export(pt_wrap)
 export(ptdata)
+export(read_glossary)
 export(rnd)
 export(rowpanel)
+export(select_glossary)
 export(sig)
 export(st2article)
 export(st2doc)
@@ -122,6 +136,7 @@ export(st_notes)
 export(st_notes_app)
 export(st_notes_conf)
 export(st_notes_detach)
+export(st_notes_glo)
 export(st_notes_rm)
 export(st_notes_str)
 export(st_notes_sub)
@@ -156,6 +171,7 @@ export(tab_spanners)
 export(tex_bold)
 export(tex_it)
 export(triage_data)
+export(update_abbrev)
 export(yaml_as_df)
 importFrom(assertthat,assert_that)
 importFrom(assertthat,validate_that)
@@ -205,17 +221,20 @@ importFrom(purrr,walk)
 importFrom(rlang,":=")
 importFrom(rlang,.data)
 importFrom(rlang,.env)
+importFrom(rlang,abort)
 importFrom(rlang,as_string)
 importFrom(rlang,enquo)
 importFrom(rlang,enquos)
 importFrom(rlang,env_clone)
+importFrom(rlang,expr)
 importFrom(rlang,have_name)
 importFrom(rlang,is_atomic)
 importFrom(rlang,is_empty)
 importFrom(rlang,is_named)
 importFrom(rlang,quo_get_expr)
 importFrom(rlang,sym)
 importFrom(rlang,syms)
+importFrom(rlang,warn)
 importFrom(stats,median)
 importFrom(stats,na.omit)
 importFrom(stats,rnorm)

R/AAAA.R

@@ -11,8 +11,8 @@
 #' @importFrom tidyr complete
 #' @importFrom forcats fct_inorder
 #' @importFrom rlang sym syms quo_get_expr as_string := .data .env is_empty
-#' @importFrom rlang enquo enquos is_named is_atomic have_name
-#' @importFrom rlang env_clone
+#' @importFrom rlang enquo enquos expr is_named is_atomic have_name
+#' @importFrom rlang env_clone abort warn
 #' @importFrom glue glue
 #' @importFrom tibble tibble as_tibble is_tibble
 #' @importFrom stats median rnorm sd na.omit setNames update