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An R library to manage day-to-day analysis of next generation sequencing (NGS) data by the Biomedical Sequencing Facility (BSF).
mkschuster/bsfR
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BSF R Library Introduction The Biomedical Sequencing Facility (BSF) [1] is part of the joint genomics core facility of the Medical University of Vienna [2] and the CeMM Research Center for Molecular Medicine [3] of the Austrian Academy of Sciences [4]. The BSF is Austria’s first technology platform dedicated to next generation sequencing in biomedicine and expected to play a catalyzing role for the development of genomic medicine in Vienna and Austria. This R library and the accompanying scripts are used for day-to-day analysis of next-generation sequencing (NGS) data sets. References [1] http://www.biomedical-sequencing.at/ [2] http://www.meduniwien.ac.at/homepage/homepage/en/ [3] http://www.cemm.oeaw.ac.at/ [4] http://www.oeaw.ac.at/english/home.html Additional Packages In addition to the packages listed in the package DESCRIPTION, the following are required for the exec scripts. * caret * ggpubr * ggrepel * pheatmap * rjson * Nozzle.R1 Licence Copyright 2013 - 2022 Michael K. Schuster Biomedical Sequencing Facility (BSF), part of the genomics core facility of the Research Center for Molecular Medicine (CeMM) of the Austrian Academy of Sciences and the Medical University of Vienna (MUW). This file is part of BSF R. BSF R is free software: you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version. BSF R is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details. You should have received a copy of the GNU Lesser General Public License along with BSF R. If not, see <http://www.gnu.org/licenses/>.
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An R library to manage day-to-day analysis of next generation sequencing (NGS) data by the Biomedical Sequencing Facility (BSF).
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