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Dockerqueue (WIP) #211

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Dockerqueue (WIP) #211

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jakob-r
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@jakob-r jakob-r commented Nov 23, 2018

Just a local docker cluster version from out SFB

mllg and others added 30 commits May 12, 2017 14:08
* robustify doJobCollection

* new backports

* Update Travis (#111)

* selectively import backports

* fix travis

* removed remotes from desc

* Warn about factors in addExperiments (#112)

* fix appveyor

* relative path handling

* improved docs for reduceResults

* paths

* added tibble to suggests to check xrefs

* improve getLogFiles

* fix logs

* fixed visibility in shared object

* Add support for `partition` in slurm template (#118)

Agreed. Thanks for the PR.

* fix testJob for win?

* simplified path lookup

* added some tests

* use %chin%

* added some comments

* docs

* docs

* fixed a bug where time stamps where rounded to seconds

* fixed printing of remaining runtimes

* fixed error message

* use withr

* warn instead of stop on the master if not all depenencies are satisfied (fixes #122)

* fix travis

* removeExperiments returns ids invisibly

* fix heuristic of getJobPars

* improved message

* always use winslash

* file.path/winslash

* vignettes

* updated README [ci skip]

* updated README [ci skip]

* docs

* depend on withr 2.0.0

* Job names (#124)

* updated NEWS

* increase version number for CRAN release

* vignette and docs

* vignette

* docs

* NEWS formating

* docs

* increase version number after CRAN release

* improved docs of reduceResults (fixes #116)

* fix for #135

* added test, fixes #135

* fix test

* README

* small fix in printer

* read-only mode (#137)

* ClusterFunctions rework: Do not swallow system errors (#138)

* added update routine for job.name

* NEWS

* improved control over sleep duration; nodename in cfSlurm

* Wait for jobs rework (#140)

* wait for brewed file before submit

* version, docs

* increased version after release

* updated travis

* fix links in vignette (#142)

* version 0.9.6

* added test for algo caching

* test for PM
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coveralls commented Nov 23, 2018

Coverage Status

Coverage remained the same at 86.948% when pulling 30dcddc on dockerqueue into 1894b6c on master.

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3 participants