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T1K v1.0.6

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@mourisl mourisl released this 10 Jul 01:53
· 9 commits to master since this release
v1.0.6
f37aa80
  • Add the option "--partial-intron-noseq" to the t1k-build script to handle IPD-KIR v2.13.0
  • Add the options to control post-analysis, .e.g. --post-varMaxGroup to control the SNP calling complexity (#27 )
  • Add the option "--gtf-gene-name-mapping" to the AddGeneCoord script to allow the conversion of GTF gene name to the IPD gene names, e.g. HFE:HLA-HFE (#30 )
  • Use log-llikelihood difference in the t1k-copynumber script (#28)
  • Fix a minor issue for stabling the output from t1k-build
  • The "--od" option can support recursive folder creation
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