You could navigate to the website, but if you don't want to:
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clone the repo
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Install dependencies.
Navigate into your new site’s directory and start it up.
yarn install
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Start the App!
yarn start
Your site is now running at http://localhost:8000!
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Start Analyzing!
Download the Example ZIP file It comes from here
Unzip the file, and press the upload button in the app and upload the folder. Once uploading and initial training is complete, you can now:
- Fetch images (Random, Positive, Negative, By Image, Training Set Positive/Negative, Confusing)
- Train on images dragged from Unclassified into Positive and Negative grids
- Evaluate (look at the confusion matrix on the training set)
- Score All (calculate the enrichment scores with Empirical Bayes and look at/download the data)
- Download the model spec and its corresponding weights files
@inproceedings{baidak2021cellprofiler,
title={CellProfiler Analyst Web (CPAW)-Exploration, analysis, and classification of biological images on the web},
author={Baidak, Bella and Hussain, Yahiya and Kelminson, Emma and Jones, Thouis R and Franke, Loraine and Haehn, Daniel},
booktitle={2021 IEEE Visualization Conference (VIS)},
pages={131--135},
year={2021},
organization={IEEE}
}