Mucosal Immunology Lab - Monash University, Melbourne AU
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microbiome-analysis
microbiome-analysis PublicA selection of analytical approaches, tools, and utilities for the processing of microbiome data derived from either 16S rRNA amplicon sequencing or shotgun metagenomics.
R 2
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autodock-gpu
autodock-gpu PublicA guide for installation and running of small molecule binding prediction using the AutoDock-GPU tool.
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RNAseq_NFCORE
RNAseq_NFCORE PublicGuide to using the nf-core/rnaseq pipeline on the MASSIVE cluster.
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metabolite-database
metabolite-database PublicA collection of information relating to metabolites and lipids, and their roles and functions in regards to mucosal immunology.
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Repositories
- lcms-analysis Public
Guide for processing and analysis of LCMS-derived metabolomics and lipidomics data.
mucosal-immunology-lab/lcms-analysis’s past year of commit activity - public_datasets Public
Here we provide a list of publicly-available datasets that we have generated and uploaded to repositories.
mucosal-immunology-lab/public_datasets’s past year of commit activity - nf-mucimmuno Public
mucosal-immunology-lab/nf-mucimmuno’s past year of commit activity - sequencing-data-submission Public
A guide to submitting sequencing data to the National Center for Biotechnology Information (NCBI) sequencing read archive (SRA) database. Includes information on uploading data to the SRA using the high-speed Aspera Connect tool.
mucosal-immunology-lab/sequencing-data-submission’s past year of commit activity - microbiome-analysis Public
A selection of analytical approaches, tools, and utilities for the processing of microbiome data derived from either 16S rRNA amplicon sequencing or shotgun metagenomics.
mucosal-immunology-lab/microbiome-analysis’s past year of commit activity - BT_groups2-4_analysis Public
The data processing and subsequent multi-omic integration and analysis pipeline utilised in analysis bronchial brush and bronchoalveolar lavage fluid from the Breathing Together Cohort groups 2-4. Group 2 are healthy preschool children, group 3 are preschool children with severe wheeze, and group 4 are school-aged asthmatics.
mucosal-immunology-lab/BT_groups2-4_analysis’s past year of commit activity
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