MILAMP: Multiple Instance Prediction of Amyloid Proteins

This is the Python implementation of MILAMP a Amyloid predicting algorithm. Papar "MILAMP: Multiple Instance Prediction of Amyloid Proteins", accepted in 2021.

The Amyloid prediction server

Online sever is avaliable at http://milamp.pythonanywhere.com/ to test proteins.

Testing

python main.py

The trained classifier are uploaded, following tasks can be accomplished

• Amyloid Prediction
• Identification of hotspot regions
• Detection in change in aggregation propensities of amnio acids

Citation

@article{munir2019milamp,
  title={MILAMP: multiple instance prediction of amyloid proteins},
  author={Munir, Farzeen and Gul, Sadaf and Asif, Amina and others},
  journal={IEEE/ACM Transactions on Computational Biology and Bioinformatics},
  volume={18},
  number={3},
  pages={1142--1150},
  year={2019},
  publisher={IEEE}
}