Skip to content

2022-04-14.build6021
Compare
Choose a tag to compare
@azat-badretdin azat-badretdin released this 22 Apr 11:53
· 122 commits to master since this release
2022-04-14.build6021
f8c8990

This release is based on PGAP-6.1. It includes the following improvements and bug fixes:

  • Improvement: faster installation achieved with parallel download and decompression of PGAP and taxcheck data packages
  • Improvement: PGAP can now be installed at a configurable location, different from the home directory. By default it will install in $HOME/.pgap, but this location can be changed by setting the environmental variable PGAP_INPUT_DIR.
  • Bug fix: assemblies for organisms without a genus in their lineage can now be annotated.
  • Bug fix: incomplete installation caused by race condition in directory creation fixed
  • Bug fix: mapping of gene symbols by orthology to genes in reference genomes is now correct. Fixes the assignments of gene symbols (e.g. recA) to features in the annotations of: Acinetobacter pittii, Bacillus subtilis, Campylobacter jejuni, Escherichia coli and Mycobacterium tuberculosis genomes. Annotation of other species is unaffected.
Assets 2
Loading