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Update README.md
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ndierckx authored Jun 3, 2020
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NOVOPlasty is a de novo assembler and heteroplasmy/variance caller for short circular genomes.

**Last updates: 05/02/20 version 3.8.2**
**Last updates: 03/06/20 version 4.0**
- Improved assembly method
- Improved heteroplasmy detection.
- Heteroplasmy output now includes AF and DP for indels.
**05/02/20**
- Resolved some bugs
- In some cases, not all the contigs were outputted, should be fixed
**07/01/20**
- UPDATED CONFIG FILE!
- Improved heteroplasmy calling
- Improved organelle assembly
- NEW FUNCTION: It is now possible to extend a seed directly, this will not correct the given seed, so it may not have mismatches
**30/10/19**
- Problem with config file in Windows fixed.
- Improved heteroplasmy detection.
**24/04/19**
- UPDATED CONFIG FILE!
- New heteroplasmy function (can link heteroplasmic mutations by local assembly)
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