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Update config.txt
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ndierckx authored Jun 3, 2020
1 parent 31627c0 commit d3b0354
Showing 1 changed file with 1 addition and 6 deletions.
7 changes: 1 addition & 6 deletions config.txt
Original file line number Diff line number Diff line change
Expand Up @@ -32,8 +32,6 @@ PCR-free =
Optional:
-----------------------
Insert size auto = yes
Insert Range = 1.9
Insert Range strict = 1.3
Use Quality Scores = no


Expand Down Expand Up @@ -88,9 +86,6 @@ PCR-free = (yes/no) If you have a PCR-free library write yes

Optional:
-----------------------
Insert size auto = (yes/no) This will finetune your insert size automatically (Default: yes)
Insert Range = This variation on the insert size, could lower it when the coverage is very high or raise it when the
coverage is too low (Default: 1.9).
Insert Range strict = Strict variation to resolve repetitive regions (Default: 1.3).
Insert size auto = (yes/no) This will finetune your insert size automatically (Default: yes)
Use Quality Scores = It will take in account the quality scores, only use this when reads have low quality, like with the
300 bp reads of Illumina (yes/no)

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