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`orthogene`: Interspecies gene mapping
================
<img src='https://github.com/neurogenomics/orthogene/raw/main/inst/hex/hex.png' title='Hex sticker for orthogene' height='300'><br>
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[![License:
GPL-3](https://img.shields.io/badge/license-GPL--3-blue.svg)](https://cran.r-project.org/web/licenses/GPL-3)
<br>
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<br> [![R build
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Authors: <i>Brian Schilder</i>
</h4>
<h4>
README updated: <i>Aug-30-2023</i>
README updated: <i>Dec-21-2023</i>
</h4>

# Intro
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utils::sessionInfo()
```

## R version 4.2.1 (2022-06-23)
## Platform: x86_64-apple-darwin17.0 (64-bit)
## Running under: macOS Big Sur ... 10.16
## R version 4.3.1 (2023-06-16)
## Platform: aarch64-apple-darwin20 (64-bit)
## Running under: macOS Sonoma 14.2
##
## Matrix products: default
## BLAS: /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRblas.0.dylib
## LAPACK: /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRlapack.dylib
## BLAS: /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib/libRblas.0.dylib
## LAPACK: /Library/Frameworks/R.framework/Versions/4.3-arm64/Resources/lib/libRlapack.dylib; LAPACK version 3.11.0
##
## locale:
## [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8
##
## time zone: America/New_York
## tzcode source: internal
##
## attached base packages:
## [1] stats graphics grDevices utils datasets methods base
##
## other attached packages:
## [1] orthogene_1.7.1
## [1] orthogene_1.8.0
##
## loaded via a namespace (and not attached):
## [1] nlme_3.1-162 bitops_1.0-7
## [3] ggtree_3.6.2 bit64_4.0.5
## [5] filelock_1.0.2 RColorBrewer_1.1-3
## [7] BiocPkgTools_1.16.1 httr_1.4.6
## [9] rprojroot_2.0.3 gh_1.4.0
## [11] tools_4.2.1 backports_1.4.1
## [13] utf8_1.2.3 R6_2.5.1
## [15] DT_0.28 lazyeval_0.2.2
## [17] DBI_1.1.3 BiocGenerics_0.44.0
## [19] colorspace_2.1-0 withr_2.5.0
## [21] tidyselect_1.2.0 bit_4.0.5
## [23] curl_5.0.0 compiler_4.2.1
## [25] graph_1.76.0 cli_3.6.1
## [27] rvest_1.0.3 Biobase_2.58.0
## [29] xml2_1.3.4 plotly_4.10.2
## [31] desc_1.4.2 scales_1.2.1
## [33] readr_2.1.4 RBGL_1.74.0
## [35] rappdirs_0.3.3 stringr_1.5.0
## [37] digest_0.6.31 yulab.utils_0.0.6
## [39] rmarkdown_2.22 rorcid_0.7.0
## [41] pkgconfig_2.0.3 htmltools_0.5.5
## [43] dbplyr_2.3.2 fastmap_1.1.1
## [45] htmlwidgets_1.6.2 rlang_1.1.1
## [47] rstudioapi_0.14 httpcode_0.3.0
## [49] RSQLite_2.3.1 badger_0.2.3
## [51] gridGraphics_0.5-1 generics_0.1.3
## [53] jsonlite_1.8.4 dplyr_1.1.2
## [55] car_3.1-2 RCurl_1.98-1.12
## [57] homologene_1.4.68.19.3.27 magrittr_2.0.3
## [59] ggplotify_0.1.0 patchwork_1.1.2
## [61] fauxpas_0.5.2 Matrix_1.5-4.1
## [63] Rcpp_1.0.10 munsell_0.5.0
## [65] fansi_1.0.4 ape_5.7-1
## [67] abind_1.4-5 babelgene_22.9
## [69] lifecycle_1.0.3 stringi_1.7.12
## [71] whisker_0.4.1 yaml_2.3.7
## [73] carData_3.0-5 biocViews_1.66.3
## [75] BiocFileCache_2.6.1 grid_4.2.1
## [77] blob_1.2.4 parallel_4.2.1
## [79] lattice_0.21-8 hms_1.1.3
## [81] knitr_1.43 pillar_1.9.0
## [83] igraph_1.5.0.1 ggpubr_0.6.0
## [85] RUnit_0.4.32 ggsignif_0.6.4
## [87] rworkflows_0.99.12 stats4_4.2.1
## [89] gprofiler2_0.2.1 crul_1.4.0
## [91] XML_3.99-0.14 glue_1.6.2
## [93] evaluate_0.21 ggfun_0.0.9
## [95] data.table_1.14.8 renv_0.17.3
## [97] BiocManager_1.30.20 treeio_1.23.1
## [99] vctrs_0.6.2 tzdb_0.4.0
## [101] grr_0.9.5 gtable_0.3.3
## [103] purrr_1.0.1 tidyr_1.3.0
## [105] cachem_1.0.8 ggplot2_3.4.2
## [107] xfun_0.39 broom_1.0.4
## [109] tidytree_0.4.2 rstatix_0.7.2
## [111] viridisLite_0.4.2 dlstats_0.1.7
## [113] tibble_3.2.1 aplot_0.1.10
## [115] rvcheck_0.2.1 memoise_2.0.1
## [117] here_1.0.1
## [1] gtable_0.3.4 babelgene_22.9
## [3] xfun_0.41 ggplot2_3.4.4
## [5] htmlwidgets_1.6.4 rstatix_0.7.2
## [7] lattice_0.22-5 vctrs_0.6.5
## [9] tools_4.3.1 generics_0.1.3
## [11] yulab.utils_0.1.1 parallel_4.3.1
## [13] tibble_3.2.1 fansi_1.0.6
## [15] pkgconfig_2.0.3 Matrix_1.6-4
## [17] ggplotify_0.1.2 data.table_1.14.10
## [19] homologene_1.4.68.19.3.27 RColorBrewer_1.1-3
## [21] desc_1.4.3 lifecycle_1.0.4
## [23] compiler_4.3.1 treeio_1.26.0
## [25] dlstats_0.1.7 munsell_0.5.0
## [27] carData_3.0-5 ggtree_3.10.0
## [29] gprofiler2_0.2.2 ggfun_0.1.3
## [31] htmltools_0.5.7 yaml_2.3.8
## [33] lazyeval_0.2.2 plotly_4.10.3
## [35] pillar_1.9.0 car_3.1-2
## [37] ggpubr_0.6.0 tidyr_1.3.0
## [39] cachem_1.0.8 grr_0.9.5
## [41] abind_1.4-5 nlme_3.1-164
## [43] tidyselect_1.2.0 aplot_0.2.2
## [45] digest_0.6.33 dplyr_1.1.4
## [47] purrr_1.0.2 rprojroot_2.0.4
## [49] fastmap_1.1.1 grid_4.3.1
## [51] here_1.0.1 colorspace_2.1-0
## [53] cli_3.6.2 magrittr_2.0.3
## [55] patchwork_1.1.3 utf8_1.2.4
## [57] broom_1.0.5 ape_5.7-1
## [59] withr_2.5.2 scales_1.3.0
## [61] backports_1.4.1 httr_1.4.7
## [63] rmarkdown_2.25 rvcheck_0.2.1
## [65] ggsignif_0.6.4 memoise_2.0.1.9000
## [67] evaluate_0.23 knitr_1.45
## [69] rworkflows_1.0.1 viridisLite_0.4.2
## [71] gridGraphics_0.5-1 rlang_1.1.2
## [73] Rcpp_1.0.11 glue_1.6.2
## [75] tidytree_0.4.6 BiocManager_1.30.22
## [77] renv_1.0.3 rstudioapi_0.15.0
## [79] jsonlite_1.8.8 R6_2.5.1
## [81] badger_0.2.3 fs_1.6.3

</details>

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