Curriculum specialist's fixes and changes for release-v1.0.3 #312
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: notebook-pr | |
| on: | |
| workflow_dispatch: | |
| pull_request: | |
| branches: | |
| - main | |
| paths: | |
| - '**/*.ipynb' | |
| - .github/workflows/notebook-pr.yaml | |
| - .github/actions/setup-ci.yaml | |
| - 'environment.yml' | |
| - '**/requirements.txt' | |
| env: | |
| NB_KERNEL: python | |
| NMA_REPO: climate-course-content | |
| NMA_MAIN_BRANCH: main | |
| ORG: neuromatch | |
| jobs: | |
| process-notebooks: | |
| # runs-on: ubuntu-latest | |
| # runs-on: ubuntu-20.04 | |
| runs-on: climate_runner | |
| steps: | |
| - name: Free up disk space | |
| uses: jlumbroso/free-disk-space@main | |
| with: | |
| # this might remove tools that are actually needed, | |
| # if set to "true" but frees about 6 GB | |
| tool-cache: false | |
| # all of these default to true, but feel free to set to | |
| # "false" if necessary for your workflow | |
| android: true | |
| dotnet: true | |
| haskell: true | |
| large-packages: true | |
| docker-images: true | |
| swap-storage: true | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| with: | |
| persist-credentials: false | |
| fetch-depth: 0 | |
| ref: ${{ github.head_ref }} | |
| - name: Update Ubuntu | |
| run: | | |
| sudo apt update | |
| - name: Run Notebooks | |
| uses: ./.github/actions/check-notebooks | |
| with: | |
| run_all: 'false' | |
| # exec_flag: '--check-only' | |
| exec_flag: '--execute' | |
| # exercise-continue-on-error: true | |
| cdsapi_uid: ${{ secrets.CDSAPI_UID }} | |
| cdsapi_key: ${{ secrets.CDSAPI_KEY }} | |
| # - name: Add PR comment | |
| # if: ${{ env.NBS != '' }} | |
| # uses: machine-learning-apps/pr-comment@master | |
| # env: | |
| # GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| # with: | |
| # path: comment.txt | |
| - name: Update READMEs | |
| if: ${{ env.NBS != '' }} | |
| run: python ci/generate_tutorial_readmes.py | |
| shell: bash -l {0} | |
| - name: Remove unreferenced derivatives | |
| if: ${{ env.NBS != '' }} | |
| run: | | |
| python ci/find_unreferenced_content.py > to_remove.txt | |
| if [ -s to_remove.txt ]; then git rm --pathspec-from-file=to_remove.txt; fi | |
| shell: bash -l {0} | |
| - name: Commit post-processed files | |
| if: ${{ env.NBS != '' }} | |
| # continue-on-error: true | |
| run: | | |
| git config --local user.email "action@github.com" | |
| git config --local user.name "GitHub Action" | |
| git add '**/*.ipynb' | |
| git add '**/static/*.png' | |
| git add '**/solutions/*.py' | |
| git add '**/README.md' | |
| git diff-index --quiet HEAD || git commit -m "Process tutorial notebooks" | |
| shell: bash -l {0} | |
| - name: Push post-processed files | |
| if: ${{ env.NBS != '' }} | |
| uses: ad-m/github-push-action@v0.6.0 | |
| with: | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| branch: ${{ github.head_ref }} | |