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train-with-vert-landmarks-variants

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This release includes models trained with vertebrae landmarks (C2, T1, T12, Sacrum) and disc landmarks.

Here's a description of each configuration in the release:

  • nnUNetTrainer__nnUNetPlans: Default nnUNet trainer configuration.
  • nnUNetTrainer__nnUNetPlans_small: Default nnUNet trainer configuration with small patch size (128x96x96).
  • nnUNetTrainer_DASegOrd0_NoMirroring__nnUNetPlans: nnUNet trainer with no mirroring data augmentation and nearest-neighbor segmentation interpolation (Instead of the default linear).
  • nnUNetTrainer_DASegOrd0_NoMirroring__nnUNetPlans_small: Same as above but with small patch size (128x96x96).
  • nnUNetTrainer_DASegOrd0_NoMirroring__nnUNetResEncUNetLPlans: nnUNet trainer with no mirroring data augmentation and nearest-neighbor segmentation interpolation (Instead of the default linear), using residual encoder plans.
  • nnUNetTrainer_DASegOrd0_NoMirroring__nnUNetResEncUNetLPlans_small: Same as above but with small patch size (128x96x96).