giving back valid measure variables:

if curvecurator&raw -> run processes, if it's curvecurator but already processed, just append _curvecurator to metric, else return normal metric
nf-core · Dec 5, 2024 · 674bf15 · 674bf15
1 parent 98c7800
commit 674bf15
Showing 1 changed file with 6 additions and 1 deletion.
diff --git a/subworkflows/local/preprocess_custom/main.nf b/subworkflows/local/preprocess_custom/main.nf
@@ -15,7 +15,12 @@ workflow PREPROCESS_CUSTOM {
         PREPROCESS_RAW_VIABILITY(dataset_name, path_data)
         FIT_CURVES(dataset_name, PREPROCESS_RAW_VIABILITY.out.path_to_toml, PREPROCESS_RAW_VIABILITY.out.curvecurator_input)
         POSTPROCESS_CURVECURATOR_DATA(dataset_name, FIT_CURVES.out.path_to_curvecurator_out, measure)
+        ch_measure = POSTPROCESS_CURVECURATOR_DATA.out.measure
+    }else if(params.curve_curator){
+        ch_measure = Channel.of("${measure}" + "_curvecurator")
+    }else{
+        ch_measure = measure
     }
     emit:
-    measure = POSTPROCESS_CURVECURATOR_DATA.out.measure
+    measure = ch_measure
 }