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Issues list

Create STAR_HTSEQ subworkflow + HTSEQ module enhancement Improvement for existing functionality
#75 opened Mar 29, 2023 by pkoscielnybio
rethink check_replicates process for DSL2 enhancement Improvement for existing functionality
#73 opened Mar 29, 2023 by bozmik
create a module for generating bacterial transcriptome fasta file enhancement Improvement for existing functionality
#64 opened Mar 28, 2023 by bozmik
Combine host annotations with quantification results enhancement Improvement for existing functionality
#57 opened Mar 28, 2023 by DorotaPikulArdigen
A new module to combine the host ambig and unique counts enhancement Improvement for existing functionality
#48 opened Mar 27, 2023 by pkoscielnybio
Update tximport_host process from DSL1 process to DSL2 module enhancement Improvement for existing functionality
#44 opened Mar 27, 2023 by opetryk
seaborn version incompats. enhancement Improvement for existing functionality
#28 opened Feb 1, 2022 by rafalcode
Output separate coverage files for host and pathogen enhancement Improvement for existing functionality
#17 opened May 31, 2021 by gprezza
Pipeline needs updating to the latest template version enhancement Improvement for existing functionality
#14 opened May 25, 2021 by ewels
ProTip! Exclude everything labeled bug with -label:bug.