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Add foldmason msa2lddtreport #7191

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merged 10 commits into from
Dec 10, 2024
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luisas
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@luisas luisas commented Dec 10, 2024

Add module to generate the visualization with foldmason

PR checklist

Closes #7181

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the module conventions in the contribution docs
  • If necessary, include test data in your PR.
  • Remove all TODO statements.
  • Emit the versions.yml file.
  • Follow the naming conventions.
  • Follow the parameters requirements.
  • Follow the input/output options guidelines.
  • Add a resource label
  • Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • nf-core modules test <MODULE> --profile docker
      • nf-core modules test <MODULE> --profile singularity
      • nf-core modules test <MODULE> --profile conda
    • For subworkflows:
      • nf-core subworkflows test <SUBWORKFLOW> --profile docker
      • nf-core subworkflows test <SUBWORKFLOW> --profile singularity
      • nf-core subworkflows test <SUBWORKFLOW> --profile conda

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Awesome job! Only small formatting suggestions 🤖

modules/nf-core/foldmason/msa2lddtreport/main.nf Outdated Show resolved Hide resolved
luisas and others added 2 commits December 10, 2024 12:09
Co-authored-by: Jose Espinosa-Carrasco <kadomu@gmail.com>
Co-authored-by: Jose Espinosa-Carrasco <kadomu@gmail.com>
@luisas luisas enabled auto-merge December 10, 2024 11:09
@luisas luisas added this pull request to the merge queue Dec 10, 2024
Merged via the queue into nf-core:master with commit d3555a4 Dec 10, 2024
29 of 30 checks passed
@luisas luisas deleted the add_foldmason_msa2lddtreport branch December 10, 2024 11:17
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new module: foldmason/msa2lddtreport
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