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update module propr/grea #7198

Merged
merged 13 commits into from
Dec 11, 2024
Merged

update module propr/grea #7198

merged 13 commits into from
Dec 11, 2024

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suzannejin
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@suzannejin suzannejin commented Dec 11, 2024

PR checklist

Closes #XXX

  • This comment contains a description of changes (with reason).
  • If you've fixed a bug or added code that should be tested, add tests!
  • If you've added a new tool - have you followed the module conventions in the contribution docs
  • If necessary, include test data in your PR.
  • Remove all TODO statements.
  • Emit the versions.yml file.
  • Follow the naming conventions.
  • Follow the parameters requirements.
  • Follow the input/output options guidelines.
  • Add a resource label
  • Use BioConda and BioContainers if possible to fulfil software requirements.
  • Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
    • For modules:
      • nf-core modules test <MODULE> --profile docker
      • nf-core modules test <MODULE> --profile singularity
      • nf-core modules test <MODULE> --profile conda
    • For subworkflows:
      • nf-core subworkflows test <SUBWORKFLOW> --profile docker
      • nf-core subworkflows test <SUBWORKFLOW> --profile singularity
      • nf-core subworkflows test <SUBWORKFLOW> --profile conda

@suzannejin suzannejin linked an issue Dec 11, 2024 that may be closed by this pull request
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@mirpedrol mirpedrol left a comment

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two small suggestions, otherwise LGTM

modules/nf-core/propr/grea/meta.yml Outdated Show resolved Hide resolved
modules/nf-core/propr/grea/templates/grea.R Outdated Show resolved Hide resolved
Co-authored-by: Júlia Mir Pedrol <mirp.julia@gmail.com>
@suzannejin suzannejin added this pull request to the merge queue Dec 11, 2024
Merged via the queue into master with commit 138b2c4 Dec 11, 2024
33 checks passed
@suzannejin suzannejin deleted the grea branch December 11, 2024 15:10
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Update GREA
2 participants